RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 KRT40Q6A162 431 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 BTNL9Q6UXG8 535 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 SEPT14Q6ZU15 432 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 LRRC8DQ7L1W4 858 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 CHST3Q7LGC8 479 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 MCF2L2Q86YR7 1114 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 TMEM47Q9BQJ4 181 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 LRFN3Q9BTN0 628 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 MTUS1Q9ULD2 1270 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 CHD7Q9P2D1 2997 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 TRANK1O15050 2925 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 WDR19Q8NEZ3 1342 aa9.55□□□□□ -0.88
ACTN1-212ENST00000554158 RALGAPA2Q2PPJ7 1873 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 ABHD14A-ACY1A0A1B0GW23 586 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 PCP11498 1178 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 MFAP1P55081 439 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 WDR5P61964 334 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 STXBP2Q15833 593 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 RASGRP2Q7LDG7 609 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 NSUN6Q8TEA1 469 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 GDPD5Q8WTR4 605 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 PPP1R13LQ8WUF5 828 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 AFG1LQ8WV93 481 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 COPS5Q92905 334 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 EVI5LQ96CN4 794 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 TTC14Q96N46 770 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 UIMC1Q96RL1 719 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 TGS1Q96RS0 853 aaKnown RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 RAD9AQ99638 391 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 ALG1Q9BT22 464 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 RNF41Q9H4P4 317 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-212ENST00000554158 EPHX3Q9H6B9 360 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 INCENPQ9NQS7 918 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 CTNNA3Q9UI47 895 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 FAM50BQ9Y247 325 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 ABCB11O95342 1321 aa9.54□□□□□ -0.88
ACTN1-212ENST00000554158 EPOPA6NHQ4 379 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 AMHP03971 560 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 MMP3P08254 477 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 PDHBP11177 359 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 ZNF543Q08ER8 600 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 PTPROQ16827 1216 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 CCDC178Q5BJE1 867 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 ARHGEF16Q5VV41 709 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 FAM117BQ6P1L5 589 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 EP400NLQ6ZTU2 488 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 IQCA1Q86XH1 822 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 PI4K2BQ8TCG2 481 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 CLEC4DQ8WXI8 215 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 ESR2Q92731 530 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 IWS1Q96ST2 819 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 MAF1Q9H063 256 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 TCP11L1Q9NUJ3 509 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 EMSYQ7Z589 1322 aa9.53□□□□□ -0.88
ACTN1-212ENST00000554158 REV3LO60673 3130 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 FAM86C2PA6NEL3 165 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 GPR37L1O60883 481 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 ALADP13716 330 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 EDNRBP24530 442 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 HAND2P61296 217 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 ALX1Q15699 326 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 LY6KQ17RY6 165 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.89
ACTN1-212ENST00000554158 MCMDC2Q4G0Z9 681 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 C20orf194Q5TEA3 1177 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 GDF6Q6KF10 455 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-212ENST00000554158 SESTD1Q86VW0 696 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 RGS22Q8NE09 1264 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 RMDN3Q96TC7 470 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 UBE2ZQ9H832 354 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-212ENST00000554158 KAT14Q9H8E8 782 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 MRPL11Q9Y3B7 192 aaKnown RBP9.52□□□□□ -0.89
ACTN1-212ENST00000554158 INSL6Q9Y581 213 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 MRVI1Q9Y6F6 885 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 MUC6Q6W4X9 2439 aa9.52□□□□□ -0.89
ACTN1-212ENST00000554158 DOCK5Q9H7D0 1870 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 GJB5O95377 273 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 FGAP02671 866 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 CKBP12277 381 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 KCNA5P22460 613 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 NOVP48745 357 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 PSEN2P49810 448 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 ERVK-21P61565 698 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 DEFB103AP81534 67 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 PTK7Q13308 1070 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 LAMC2Q13753 1193 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 MFSD10Q14728 455 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 CDC37Q16543 378 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-212ENST00000554158 KIAA0753Q2KHM9 967 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 ANKRD45Q5TZF3 282 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 VPS53Q5VIR6 699 aa9.51□□□□□ -0.89
ACTN1-212ENST00000554158 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms