RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CDK5RAP1Q96SZ6 601 aaKnown RBP4.3□□□□□ -1.72
SRP54-204ENST00000553923 GBP3Q9H0R5 595 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 PHAXQ9H814 394 aaKnown RBP4.3□□□□□ -1.72
SRP54-204ENST00000553923 CLEC1BQ9P126 229 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 PCDHB10Q9UN67 800 aa4.3□□□□□ -1.72
SRP54-204ENST00000553923 A0A1W2PQH9 124 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 NPEPPSL1A6NEC2 478 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 ARNTLO00327 626 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 PPM1BO75688 479 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 PLS3P13797 630 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 IL13P35225 146 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 STAT5AP42229 794 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 MLLT6P55198 1093 aaPredicted RBP4.29□□□□□ -1.72
SRP54-204ENST00000553923 PPP2CBP62714 309 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 PPP2CAP67775 309 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 KLF10Q13118 480 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 FBXW10Q5XX13 1052 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 ZNF585AQ6P3V2 769 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 Q8N1Y9 231 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 IGDCC4Q8TDY8 1250 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 PTPN18Q99952 460 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 AP5M1Q9H0R1 490 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 GPRC5CQ9NQ84 441 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 MARCH2Q9P0N8 246 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 WASF3Q9UPY6 502 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 SLC12A7Q9Y666 1083 aa4.29□□□□□ -1.72
SRP54-204ENST00000553923 THBDP07204 575 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 GIPRP48546 466 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 RACK1P63244 317 aaKnown RBP4.28□□□□□ -1.72
SRP54-204ENST00000553923 SLC7A5Q01650 507 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 ZNF394Q53GI3 561 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 ADAT2Q7Z6V5 191 aaKnown RBP4.28□□□□□ -1.72
SRP54-204ENST00000553923 PLEKHH3Q7Z736 793 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 ZC3H18Q86VM9 953 aaKnown RBP4.28□□□□□ -1.72
SRP54-204ENST00000553923 RIOX2Q8IUF8 465 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 TEX2Q8IWB9 1127 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 C19orf47Q8N9M1 422 aaKnown RBP4.28□□□□□ -1.72
SRP54-204ENST00000553923 TMEM87AQ8NBN3 555 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 ZCCHC14Q8WYQ9 949 aaKnown RBP4.28□□□□□ -1.72
SRP54-204ENST00000553923 ING1Q9UK53 422 aaPredicted RBP4.28□□□□□ -1.72
SRP54-204ENST00000553923 EMC9Q9Y3B6 208 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 TESMINQ9Y4I5 508 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 X6R8D5 127 aa4.28□□□□□ -1.72
SRP54-204ENST00000553923 C22orf46C9J442 243 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 RBM10P98175 930 aaKnown RBP4.27□□□□□ -1.73
SRP54-204ENST00000553923 SCRN1Q12765 414 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 CCDC81Q6ZN84 652 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 MILR1Q7Z6M3 343 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 CIR1Q86X95 450 aaPredicted RBP4.27□□□□□ -1.73
SRP54-204ENST00000553923 PALM2Q8IXS6 379 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 NPLOC4Q8TAT6 608 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 GIPC2Q8TF65 315 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 BCL2L13Q9BXK5 485 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 MEGF9Q9H1U4 602 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 NGRNQ9NPE2 291 aaKnown RBP4.27□□□□□ -1.73
SRP54-204ENST00000553923 GINM1Q9NU53 330 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 APEX2Q9UBZ4 518 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 TIMELESSQ9UNS1 1208 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 PCDHGB7Q9Y5F8 929 aa4.27□□□□□ -1.73
SRP54-204ENST00000553923 CYP1A1P04798 512 aaPredicted RBP4.26□□□□□ -1.73
SRP54-204ENST00000553923 FPR2P25090 351 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 SOX9P48436 509 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 SELENOPP49908 381 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 FANCCQ00597 558 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 SPDYAQ5MJ70 313 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 SLFN13Q68D06 897 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 USP51Q70EK9 711 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 NLRP10Q86W26 655 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 Q8TCH9 128 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 FRS2Q8WU20 508 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 TMEM168Q9H0V1 697 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 AKT3Q9Y243 479 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 ZNF652Q9Y2D9 606 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 HS3ST3A1Q9Y663 406 aa4.26□□□□□ -1.73
SRP54-204ENST00000553923 ZNF623O75123 536 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 LRG1P02750 347 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 COL6A1P12109 1028 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 ZNF76P36508 570 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 NKX3-2P78367 333 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 COL9A2Q14055 689 aaPredicted RBP4.25□□□□□ -1.73
SRP54-204ENST00000553923 CCDC27Q2M243 656 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 ZNF326Q5BKZ1 582 aaKnown RBP4.25□□□□□ -1.73
SRP54-204ENST00000553923 MROH9Q5TGP6 573 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 PRAMEF18Q5VWM3 479 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 ARHGEF18Q6ZSZ5 1173 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 KBTBD2Q8IY47 623 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 MRGPRX3Q96LB0 322 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 ZSWIM3Q96MP5 696 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 SEMA4AQ9H3S1 761 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 DEF6Q9H4E7 631 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 CYP26B1Q9NR63 512 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 TMEFF2Q9UIK5 374 aaPredicted RBP4.25□□□□□ -1.73
SRP54-204ENST00000553923 SUGT1Q9Y2Z0 365 aa4.25□□□□□ -1.73
SRP54-204ENST00000553923 ANKRD34BA5PLL1 514 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 MUSKO15146 869 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 B4GALT4O60513 344 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 TADA3O75528 432 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 KCNH1O95259 989 aa4.24□□□□□ -1.73
SRP54-204ENST00000553923 EIF6P56537 245 aaKnown RBP4.24□□□□□ -1.73
SRP54-204ENST00000553923 TEPPQ6URK8 271 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms