RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 SYNE3Q6ZMZ3 975 aa23.34■■□□□ 1.33
PRAF2-202ENST00000553851 FANCBQ8NB91 859 aa23.34■■□□□ 1.33
PRAF2-202ENST00000553851 TCEANC2Q96MN5 208 aa23.34■■□□□ 1.33
PRAF2-202ENST00000553851 ALDH8A1Q9H2A2 487 aaPredicted RBP23.34■■□□□ 1.33
PRAF2-202ENST00000553851 MRVI1Q9Y6F6 885 aa23.34■■□□□ 1.33
PRAF2-202ENST00000553851 LAMA2P24043 3122 aaKnown RBP23.34■■□□□ 1.33
PRAF2-202ENST00000553851 CYP2C18P33260 490 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 NBPF20Q3BBV1 942 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 Q7L0L9 218 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 MICU3Q86XE3 530 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 CCDC82Q8N4S0 544 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 TMEM199Q8N511 208 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 DEFB123Q8N688 67 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 IL31RAQ8NI17 732 aa23.33■■□□□ 1.33
PRAF2-202ENST00000553851 KIAA1217Q5T5P2 1943 aa23.33■■□□□ 1.32
PRAF2-202ENST00000553851 RGS20O76081 388 aa23.33■■□□□ 1.32
PRAF2-202ENST00000553851 CCND2P30279 289 aa23.33■■□□□ 1.32
PRAF2-202ENST00000553851 PPIGQ13427 754 aaKnown RBP eCLIP23.33■■□□□ 1.32
PRAF2-202ENST00000553851 ZFP91Q96JP5 570 aaPredicted RBP23.33■■□□□ 1.32
PRAF2-202ENST00000553851 RNPC3Q96LT9 517 aaKnown RBP23.33■■□□□ 1.32
PRAF2-202ENST00000553851 HIPK3Q9H422 1215 aa23.33■■□□□ 1.32
PRAF2-202ENST00000553851 MMP3P08254 477 aa23.32■■□□□ 1.32
PRAF2-202ENST00000553851 CSF2RAP15509 400 aa23.32■■□□□ 1.32
PRAF2-202ENST00000553851 FAM47CQ5HY64 1035 aa23.32■■□□□ 1.32
PRAF2-202ENST00000553851 APOA5Q6Q788 366 aa23.32■■□□□ 1.32
PRAF2-202ENST00000553851 TMTC3Q6ZXV5 915 aa23.32■■□□□ 1.32
PRAF2-202ENST00000553851 PPP1R13LQ8WUF5 828 aa23.32■■□□□ 1.32
PRAF2-202ENST00000553851 TRMT13Q9NUP7 481 aaKnown RBP23.32■■□□□ 1.32
PRAF2-202ENST00000553851 hCG_1642624A0A1W2PR95 340 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 CHMP4BP1P59074 171 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 LAMC2Q13753 1193 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 KCNV1Q6PIU1 500 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 USP17L6PQ6QN14 398 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 DHX37Q8IY37 1157 aaKnown RBP23.31■■□□□ 1.32
PRAF2-202ENST00000553851 SMARCC2Q8TAQ2 1214 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 KCNB2Q92953 911 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 CUL5Q93034 780 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 EMID1Q96A84 441 aaPredicted RBP23.31■■□□□ 1.32
PRAF2-202ENST00000553851 BRPF3Q9ULD4 1205 aa23.31■■□□□ 1.32
PRAF2-202ENST00000553851 UMODL1Q5DID0 1318 aa23.3■■□□□ 1.32
PRAF2-202ENST00000553851 HMGB1P09429 215 aaKnown RBP23.3■■□□□ 1.32
PRAF2-202ENST00000553851 SUPT20HL2P0C7V6 817 aa23.3■■□□□ 1.32
PRAF2-202ENST00000553851 CASTP20810 708 aaKnown RBP23.3■■□□□ 1.32
PRAF2-202ENST00000553851 NFRKBQ6P4R8 1299 aa23.3■■□□□ 1.32
PRAF2-202ENST00000553851 C16orf59Q7L2K0 433 aa23.3■■□□□ 1.32
PRAF2-202ENST00000553851 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.3■■□□□ 1.32
PRAF2-202ENST00000553851 NOC4LQ9BVI4 516 aaKnown RBP23.3■■□□□ 1.32
PRAF2-202ENST00000553851 SCN10AQ9Y5Y9 1956 aa23.3■■□□□ 1.32
PRAF2-202ENST00000553851 MEIS2O14770 477 aa23.29■■□□□ 1.32
PRAF2-202ENST00000553851 HSPA4P34932 840 aa23.29■■□□□ 1.32
PRAF2-202ENST00000553851 CCL23P55773 120 aa23.29■■□□□ 1.32
PRAF2-202ENST00000553851 DGKDQ16760 1214 aa23.29■■□□□ 1.32
PRAF2-202ENST00000553851 TMEM240Q5SV17 173 aa23.29■■□□□ 1.32
PRAF2-202ENST00000553851 RBM28Q9NW13 759 aaKnown RBP23.29■■□□□ 1.32
PRAF2-202ENST00000553851 FRMPD4Q14CM0 1322 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 PIK3CDO00329 1044 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 ZBTB43O43298 467 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 ACRP10323 421 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 TGFB3P10600 412 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 CYP2C9P11712 490 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 CPA1P15085 419 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 MRPS9P82933 396 aaKnown RBP23.28■■□□□ 1.32
PRAF2-202ENST00000553851 SP2Q02086 613 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 PPTC7Q8NI37 304 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 GPKOWQ92917 476 aaPredicted RBP eCLIP23.28■■□□□ 1.32
PRAF2-202ENST00000553851 PSTPIP2Q9H939 334 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 MTMR10Q9NXD2 777 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 SNX14Q9Y5W7 946 aa23.28■■□□□ 1.32
PRAF2-202ENST00000553851 SORBS3O60504 671 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 REC8O95072 547 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 GGPS1O95749 300 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 SMAD3P84022 425 aaKnown RBP23.27■■□□□ 1.32
PRAF2-202ENST00000553851 FGD1P98174 961 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 PTPN11Q06124 597 aaPredicted RBP23.27■■□□□ 1.32
PRAF2-202ENST00000553851 RTN1Q16799 776 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 CELF3Q5SZQ8 465 aaKnown RBP23.27■■□□□ 1.32
PRAF2-202ENST00000553851 MYSM1Q5VVJ2 828 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 FAM109BQ6ICB4 259 aaPredicted RBP23.27■■□□□ 1.32
PRAF2-202ENST00000553851 ZNF365Q70YC5 407 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 KAT2BQ92831 832 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
PRAF2-202ENST00000553851 IL23AQ9NPF7 189 aa23.27■■□□□ 1.32
PRAF2-202ENST00000553851 KLF18A0A0U1RQI7 1052 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 STAM2O75886 525 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 GNPTABQ3T906 1256 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 HEATR3Q7Z4Q2 680 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 SPATA33Q96N06 139 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 WNT8AQ9H1J5 351 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 PPP4R2Q9NY27 417 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
PRAF2-202ENST00000553851 NAP1L2Q9ULW6 460 aaPredicted RBP23.26■■□□□ 1.31
PRAF2-202ENST00000553851 MYH7BA7E2Y1 1941 aa23.25■■□□□ 1.31
PRAF2-202ENST00000553851 UBA1P22314 1058 aaKnown RBP23.25■■□□□ 1.31
PRAF2-202ENST00000553851 PSRC1Q6PGN9 363 aaPredicted RBP23.25■■□□□ 1.31
PRAF2-202ENST00000553851 INPP4AQ96PE3 977 aaPredicted RBP23.25■■□□□ 1.31
PRAF2-202ENST00000553851 MLXIPQ9HAP2 919 aa23.25■■□□□ 1.31
PRAF2-202ENST00000553851 CNTNAP5Q8WYK1 1306 aa23.24■■□□□ 1.31
PRAF2-202ENST00000553851 GOLGA8AA7E2F4 631 aa23.24■■□□□ 1.31
PRAF2-202ENST00000553851 GOLGA8BA8MQT2 603 aa23.24■■□□□ 1.31
PRAF2-202ENST00000553851 PPFIA4O75335 1185 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms