RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 MEIS2O14770 477 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 CLTBP09497 229 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 CDC27P30260 824 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 METAP2P50579 478 aaKnown RBP eCLIP11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 FUT2Q10981 343 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 LY6KQ17RY6 165 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 SMARCC2Q8TAQ2 1214 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 COPS5Q92905 334 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 CUL5Q93034 780 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 KIAA1217Q5T5P2 1943 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 TRIM43BA6NCK2 446 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 RGS20O76081 388 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 CCND2P30279 289 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 HEATR3Q7Z4Q2 680 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 IL31RAQ8NI17 732 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 TRIM43Q96BQ3 446 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 TM6SF1Q9BZW5 370 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 MRVI1Q9Y6F6 885 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
HNRNPC-208ENST00000553753 GH1P01241 217 aa11.75□□□□□ -0.53
HNRNPC-208ENST00000553753 PURAQ00577 322 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-208ENST00000553753 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
HNRNPC-208ENST00000553753 KCNV1Q6PIU1 500 aa11.75□□□□□ -0.53
HNRNPC-208ENST00000553753 GPKOWQ92917 476 aaPredicted RBP eCLIP11.75□□□□□ -0.535e-6■■□□□ 13.3
HNRNPC-208ENST00000553753 SEZ6LQ9BYH1 1024 aa11.75□□□□□ -0.53
HNRNPC-208ENST00000553753 TMEM39AQ9NV64 488 aa11.75□□□□□ -0.53
HNRNPC-208ENST00000553753 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 KPNA6O60684 536 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 TGFB3P10600 412 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 FXR1P51114 621 aaKnown RBP eCLIP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 EVCP57679 992 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 PSMC6P62333 389 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 FAM126BQ8IXS8 530 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 STAM2O75886 525 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 MYL3P08590 195 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 RAG1P15918 1043 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 ITGB8P26012 769 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 WWC2Q6AWC2 1192 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 TDHQ8IZJ6 230 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 AFG1LQ8WV93 481 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 BADQ92934 168 aa11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 EMID1Q96A84 441 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 MTG1Q9BT17 334 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 UPF3BQ9BZI7 483 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-208ENST00000553753 SPDYE3A6NKU9 549 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 hCG_1984214I3L0E3 225 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 TLR3O15455 904 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 CD4P01730 458 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 PDIA3P30101 505 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 NAPAP54920 295 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 LAMC2Q13753 1193 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 GNPTABQ3T906 1256 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 PCNX4Q63HM2 1172 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 ZNF713Q8N859 430 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 INPP4AQ96PE3 977 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 BARHL2Q9NY43 387 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 NID2Q14112 1375 aa11.73□□□□□ -0.53
HNRNPC-208ENST00000553753 MMP3P08254 477 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 ANAPC15P60006 121 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 SP2Q02086 613 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 DGKDQ16760 1214 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 UBE2SQ16763 222 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 RIC8AQ9NPQ8 531 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 SMCO2A6NFE2 343 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 STXBP3O00186 592 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 B4GALT4O60513 344 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 GGPS1O95749 300 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 TIMP1P01033 207 aa11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 UBA1P22314 1058 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-208ENST00000553753 ICAM3P32942 547 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms