RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 SV2BQ7L1I2 683 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 ANKRD13CQ8N6S4 541 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 EHBP1Q8NDI1 1231 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 SNX29Q8TEQ0 813 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CCDC47Q96A33 483 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CALML4Q96GE6 196 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CCDC42Q96M95 316 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 SELENOOQ9BVL4 669 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 IFIH1Q9BYX4 1025 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 RIOX1Q9H6W3 641 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 MMRN2Q9H8L6 949 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 SNX12Q9UMY4 172 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 PCDHA13Q9Y5I0 950 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 ESYT2A0FGR8 921 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 TARSL2A2RTX5 802 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 AGPSO00116 658 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 TRIM66O15016 1216 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 IPO7O95373 1038 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 HNRNPH3P31942 346 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 NOVP48745 357 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 TNNI2P48788 182 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 FXR2P51116 673 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 EHHADHQ08426 723 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 PICALMQ13492 652 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 MAN2A1Q16706 1144 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 TMEM119Q4V9L6 283 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 PRR5LQ6MZQ0 368 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 RRAGAQ7L523 313 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 CNBD1Q8NA66 436 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 RAD54LQ92698 747 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 KANSL2Q9H9L4 492 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 GPCPD1Q9NPB8 672 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 TMEM51Q9NW97 253 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 DMGDHQ9UI17 866 aaKnown RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 GREB1LQ9C091 1923 aaPredicted RBP7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 THSD7AQ9UPZ6 1657 aa7.7□□□□□ -1.18
LINC-ROR-201ENST00000553704 LTBP4Q8N2S1 1624 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 GGCXP38435 758 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 SLC1A4P43007 532 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 NT5C2P49902 561 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 ADCY7P51828 1080 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 GFPT1Q06210 699 aaPredicted RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 KCNMA1Q12791 1236 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 HSP90B2PQ58FF3 399 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 MFSD14BQ5SR56 506 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 DDX12PQ92771 950 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 MTMR8Q96EF0 704 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 LRRC1Q9BTT6 524 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 VIPAS39Q9H9C1 493 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 STK17AQ9UEE5 414 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 FEZ2Q9UHY8 353 aaPredicted RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 LRRC37AA6NMS7 1700 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 GAKO14976 1311 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 ATAD5Q96QE3 1844 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 PLIN4Q96Q06 1357 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 UBR3Q6ZT12 1888 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 QSER1Q2KHR3 1735 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 SIPA1L1O43166 1804 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 TLR2O60603 784 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 LCA5LO95447 670 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 TUBBP07437 444 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 LDHCP07864 332 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 MATR3P43243 847 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 AMPD3Q01432 767 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 SLC7A5Q01650 507 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 CACNB1Q02641 598 aaPredicted RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 SPA17Q15506 151 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 ZCWPW2Q504Y3 356 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 HGSNATQ68CP4 663 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 TTBK2Q6IQ55 1244 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 PDXDC1Q6P996 788 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 LRRC31Q6UY01 552 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 DPP8Q6V1X1 898 aaPredicted RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 CCNI2Q6ZMN8 369 aaPredicted RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 GUF1Q8N442 669 aaKnown RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 AENQ8WTP8 325 aaKnown RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 HAS1Q92839 578 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 DNAJC19Q96DA6 116 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 C8orf37Q96NL8 207 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 OSBPL9Q96SU4 736 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 DDX4Q9NQI0 724 aaKnown RBP7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 TBC1D7Q9P0N9 293 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
LINC-ROR-201ENST00000553704 NPHP3-ACAD11A0A0J9YXS1 232 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 BUB1O43683 1085 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 IL1R1P14778 569 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 COASYQ13057 564 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 ASTE1Q2TB18 679 aaPredicted RBP7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 C15orf52Q6ZUT6 534 aaKnown RBP7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 SRLQ86TD4 932 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 CDK5RAP3Q96JB5 506 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 RPGRIP1Q96KN7 1286 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 TSGA10Q9BZW7 698 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 DEF6Q9H4E7 631 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 JMJD4Q9H9V9 463 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 ZNF287Q9HBT7 754 aa7.68□□□□□ -1.18
LINC-ROR-201ENST00000553704 NLRC4Q9NPP4 1024 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms