RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 STYK1Q6J9G0 422 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 SPATC1Q76KD6 591 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 CEP68Q76N32 757 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 C1QL4Q86Z23 238 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 LRRC56Q8IYG6 542 aaPredicted RBP5.12□□□□□ -1.59
VRK1-202ENST00000553683 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.12□□□□□ -1.59
VRK1-202ENST00000553683 TRMT2BQ96GJ1 504 aaKnown RBP5.12□□□□□ -1.59
VRK1-202ENST00000553683 IPO9Q96P70 1041 aaKnown RBP5.12□□□□□ -1.59
VRK1-202ENST00000553683 SGPP1Q9BX95 441 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 SNTG2Q9NY99 539 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 FBLN5Q9UBX5 448 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 COA3Q9Y2R0 106 aaPredicted RBP5.12□□□□□ -1.59
VRK1-202ENST00000553683 KCTD3Q9Y597 815 aa5.12□□□□□ -1.59
VRK1-202ENST00000553683 PRODHO43272 600 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 MAFKO60675 156 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 BCL6P41182 706 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 SUMO1P63165 101 aaKnown RBP5.11□□□□□ -1.59
VRK1-202ENST00000553683 ZNF200P98182 395 aaPredicted RBP5.11□□□□□ -1.59
VRK1-202ENST00000553683 MAMDC2Q7Z304 686 aaPredicted RBP5.11□□□□□ -1.59
VRK1-202ENST00000553683 B3GNT8Q7Z7M8 397 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 MIB1Q86YT6 1006 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 PHOSPHO1Q8TCT1 267 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 PDGFDQ9GZP0 370 aaPredicted RBP5.11□□□□□ -1.59
VRK1-202ENST00000553683 CDIP1Q9H305 208 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 EPB41L1Q9H4G0 881 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 ZNF652Q9Y2D9 606 aa5.11□□□□□ -1.59
VRK1-202ENST00000553683 BUB1BO60566 1050 aaPredicted RBP5.1□□□□□ -1.59
VRK1-202ENST00000553683 DGKIO75912 1065 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 ASGR2P07307 311 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 EPHB3P54753 998 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 GPR85P60893 370 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 KIZQ2M2Z5 673 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 LBX2Q6XYB7 198 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 NLRP10Q86W26 655 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 FAM129CQ86XR2 697 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 TEX2Q8IWB9 1127 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 TMEFF1Q8IYR6 380 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 IFNL3Q8IZI9 196 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 ALG3Q92685 438 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 PTPRN2Q92932 1015 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 DACT3Q96B18 629 aaPredicted RBP5.1□□□□□ -1.59
VRK1-202ENST00000553683 SRPK1Q96SB4 655 aaKnown RBP5.1□□□□□ -1.59
VRK1-202ENST00000553683 OSBPL2Q9H1P3 480 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 NUB1Q9Y5A7 615 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 PCDHA2Q9Y5H9 948 aa5.1□□□□□ -1.59
VRK1-202ENST00000553683 KDM2BQ8NHM5 1336 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 TRBV23-1A0A0A0MS06 115 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 AQP7O14520 342 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 WNT9AO14904 365 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 HGSO14964 777 aaPredicted RBP5.09□□□□□ -1.59
VRK1-202ENST00000553683 NUAK1O60285 661 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 TADA3O75528 432 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 GABREP78334 506 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 CACNB2Q08289 660 aaPredicted RBP5.09□□□□□ -1.59
VRK1-202ENST00000553683 NTRK3Q16288 839 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 TCERG1LQ5VWI1 586 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 CNKSR3Q6P9H4 555 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 USP53Q70EK8 1073 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 THAP3Q8WTV1 239 aaPredicted RBP5.09□□□□□ -1.59
VRK1-202ENST00000553683 CDC6Q99741 560 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 DHRS4Q9BTZ2 278 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 PHF20Q9BVI0 1012 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 CLDND1Q9NY35 253 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 HSPBP1Q9NZL4 362 aa5.09□□□□□ -1.59
VRK1-202ENST00000553683 FAM221BA6H8Z2 402 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 BTBD11A6QL63 1104 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 KRIT1O00522 736 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 SGSM2O43147 1006 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 LCP1P13796 627 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 FPR2P25090 351 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 FOXO4P98177 505 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 SSPNQ14714 243 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 ETV3LQ6ZN32 361 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 KRTAP1-3Q8IUG1 177 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 TRIM48Q8IWZ4 208 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 ZSWIM2Q8NEG5 633 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.08□□□□□ -1.6
VRK1-202ENST00000553683 KISS1RQ969F8 398 aaPredicted RBP5.08□□□□□ -1.6
VRK1-202ENST00000553683 SMOC1Q9H4F8 434 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 EPB41L4AQ9HCS5 686 aaPredicted RBP5.08□□□□□ -1.6
VRK1-202ENST00000553683 SLC6A20Q9NP91 592 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 RAPGEFL1Q9UHV5 662 aa5.08□□□□□ -1.6
VRK1-202ENST00000553683 CCDC85CA6NKD9 419 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 KCNQ2O43526 872 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 DIAPH1O60610 1272 aaKnown RBP5.07□□□□□ -1.6
VRK1-202ENST00000553683 EFCAB14O75071 495 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 FAM153BP0C7A2 387 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 ZSCAN22P10073 491 aaPredicted RBP5.07□□□□□ -1.6
VRK1-202ENST00000553683 ATF2P15336 505 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 PI3P19957 117 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 PMLP29590 882 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 HTRA3P83110 453 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 HABP4Q5JVS0 413 aaKnown RBP5.07□□□□□ -1.6
VRK1-202ENST00000553683 YOD1Q5VVQ6 348 aaPredicted RBP5.07□□□□□ -1.6
VRK1-202ENST00000553683 ZC3H18Q86VM9 953 aaKnown RBP5.07□□□□□ -1.6
VRK1-202ENST00000553683 FAM126BQ8IXS8 530 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 TTLL11Q8NHH1 800 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 CHAMP1Q96JM3 812 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 DNAJC7Q99615 494 aa5.07□□□□□ -1.6
VRK1-202ENST00000553683 ALG1Q9BT22 464 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms