RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CCDC96Q2M329 555 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 DPCR1Q3MIW9 517 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 MOXD1Q6UVY6 613 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 HOMER1Q86YM7 354 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 ZFPM1Q8IX07 1006 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 LRRC27Q9C0I9 530 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 ZNF277Q9NRM2 450 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-221ENST00000553498 SERTAD1Q9UHV2 236 aa8.26□□□□□ -1.09
ATXN3-221ENST00000553498 F5H6K3 240 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 RAD17O75943 681 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 BMP3P12645 472 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 VEGFAP15692 232 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-221ENST00000553498 UBA7P41226 1012 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 USP11P51784 963 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 AMPD3Q01432 767 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 CXCL9Q07325 125 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 KLRC3Q07444 240 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 PNOCQ13519 176 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 INF2Q27J81 1249 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 TMEM266Q2M3C6 531 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 AOPEPQ8N6M6 819 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 PIBF1Q8WXW3 757 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 CCDC47Q96A33 483 aaKnown RBP8.25□□□□□ -1.09
ATXN3-221ENST00000553498 DHX58Q96C10 678 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 PAGE5Q96GU1 130 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 EPSTI1Q96J88 318 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 AMNQ9BXJ7 453 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 PDGFDQ9GZP0 370 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-221ENST00000553498 UBA5Q9GZZ9 404 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 PSTPIP2Q9H939 334 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 TMX2Q9Y320 296 aa8.25□□□□□ -1.09
ATXN3-221ENST00000553498 FRMPD2Q68DX3 1309 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-221ENST00000553498 TTC24A2A3L6 582 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-221ENST00000553498 AP5Z1O43299 807 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 NRDCO43847 1150 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 CCNT1O60563 726 aaKnown RBP8.24□□□□□ -1.09
ATXN3-221ENST00000553498 ASNSP08243 561 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 STAT6P42226 847 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 CACNB3P54284 484 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 ATP2B2Q01814 1243 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 GRIN1Q05586 938 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 DPYDQ12882 1025 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 KCNB1Q14721 858 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 NCAPHQ15003 741 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 SEPT2Q15019 361 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 SYDE2Q5VT97 1194 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 RRAGBQ5VZM2 374 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 FAM160B2Q86V87 743 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 CRIPAKQ8N1N5 446 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 IGSF22Q8N9C0 903 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 TBCKQ8TEA7 893 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 CHURC1Q8WUH1 139 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 VAT1LQ9HCJ6 419 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 MYOZ2Q9NPC6 264 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 RRAGDQ9NQL2 400 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-221ENST00000553498 DISC1Q9NRI5 854 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 MAN1B1Q9UKM7 699 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
ATXN3-221ENST00000553498 CHD4Q14839 1912 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CYP3A7-CYP3A51PA0A087WV96 503 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 TCP10L2B9ZVM9 353 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 PIK3CDO00329 1044 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 TBX3O15119 743 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 AP1G2O75843 785 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 NDUFB10O96000 172 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 GH2P01242 217 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CYP3A7P24462 503 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
ATXN3-221ENST00000553498 TERF1P54274 439 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 EIF6P56537 245 aaKnown RBP8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CDC37Q16543 378 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-221ENST00000553498 IL17AQ16552 155 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CALCRLQ16602 461 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 LETM2Q2VYF4 491 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 SPECC1Q5M775 1068 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-221ENST00000553498 FBXO11Q86XK2 927 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 SAMD3Q8N6K7 520 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CALML4Q96GE6 196 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 MTMR9Q96QG7 549 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CTAGE1Q96RT6 745 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-221ENST00000553498 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 KBTBD4Q9NVX7 518 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 ZBTB21Q9ULJ3 1066 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 RABGAP1Q9Y3P9 1069 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 PCDHA1Q9Y5I3 950 aa8.23□□□□□ -1.09
ATXN3-221ENST00000553498 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATXN3-221ENST00000553498 CNTNAP1P78357 1384 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms