RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 TBCKQ8TEA7 893 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
SYNE2-208ENST00000553289 CCDC151A5D8V7 595 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 LRRC63Q05C16 580 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 PRKG1Q13976 671 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 PSMD6Q15008 389 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
SYNE2-208ENST00000553289 Q9H521 79 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 PDE11AQ9HCR9 933 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 DAAM1Q9Y4D1 1078 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 ERBB3P21860 1342 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 GOLGA8CPA6NN73 597 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 ATP1A2P50993 1020 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 OSBP2Q969R2 916 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 IPO11Q9UI26 975 aaKnown RBP12.56□□□□□ -0.4
SYNE2-208ENST00000553289 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
SYNE2-208ENST00000553289 MUM1Q2TAK8 710 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
SYNE2-208ENST00000553289 PAGR1Q9BTK6 254 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 NPHP4O75161 1426 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-208ENST00000553289 A6NJR5 290 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 MUM1L1Q5H9M0 696 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 CC2D2BQ6DHV5 1058 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 PLEKHA4Q9H4M7 779 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 MRPL47Q9HD33 250 aaKnown RBP12.55□□□□□ -0.4
SYNE2-208ENST00000553289 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 UGGT1Q9NYU2 1555 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 TXNDC9O14530 226 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-208ENST00000553289 SERPING1P05155 500 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 NRBP1Q9UHY1 535 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 TLR3O15455 904 aaKnown RBP12.55□□□□□ -0.4
SYNE2-208ENST00000553289 LPXNO60711 386 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 VPS41P49754 854 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 MESDQ14696 234 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 ANKRD36BP1Q96IX9 119 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 INTS9Q9NV88 658 aaKnown RBP12.55□□□□□ -0.4
SYNE2-208ENST00000553289 STK38LQ9Y2H1 464 aa12.55□□□□□ -0.4
SYNE2-208ENST00000553289 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 RCAN1P53805 252 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 PRPSAP1Q14558 356 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 PUS7LQ9H0K6 701 aaKnown RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 SUGCTQ9HAC7 445 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 HEXIM1O94992 359 aaKnown RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 CUL4BQ13620 913 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 CNOT10Q9H9A5 744 aaKnown RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 PCDHB4Q9Y5E5 795 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 ARHGAP42A6NI28 874 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 BMP3P12645 472 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 MAPK4P31152 587 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 SARM1Q6SZW1 724 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 CCDC197Q8NCU1 140 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 ZNF653Q96CK0 615 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 BRIP1Q9BX63 1249 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 ZSWIM5Q9P217 1185 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 ADD3Q9UEY8 706 aaKnown RBP12.54□□□□□ -0.4
SYNE2-208ENST00000553289 STK36Q9NRP7 1315 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 INHBAP08476 426 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 ANKRD13CQ8N6S4 541 aa12.54□□□□□ -0.4
SYNE2-208ENST00000553289 H7C0C1 242 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
SYNE2-208ENST00000553289 ECEL1O95672 775 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 ATP5OP48047 213 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
SYNE2-208ENST00000553289 SLMAPQ14BN4 828 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 PIGSQ96S52 555 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 KMT5AQ9NQR1 393 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 ANKFY1Q9P2R3 1169 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 H7C1W4 665 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 CCNA1P78396 465 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
SYNE2-208ENST00000553289 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 ROBO2Q9HCK4 1378 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 MED7O43513 233 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 SASH1O94885 1247 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 OATP04181 439 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
SYNE2-208ENST00000553289 SURF1Q15526 300 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms