RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 VSIG10LQ86VR7 867 aa21.65■■□□□ 1.06
HDAC4-217ENST00000553145 UPF3BQ9BZI7 483 aaKnown RBP21.65■■□□□ 1.06
HDAC4-217ENST00000553145 V9GY48 417 aaPredicted RBP21.65■■□□□ 1.06
HDAC4-217ENST00000553145 GRIN2DO15399 1336 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 ARVCFO00192 962 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 PIK3CDO00329 1044 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 ZEB2O60315 1214 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 CLTBP09497 229 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 PSMC6P62333 389 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 ARHGAP1Q07960 439 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 FAAP100Q0VG06 881 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 SMARCC2Q8TAQ2 1214 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 TM6SF1Q9BZW5 370 aa21.64■■□□□ 1.05
HDAC4-217ENST00000553145 DDX41Q9UJV9 622 aaKnown RBP21.64■■□□□ 1.05
HDAC4-217ENST00000553145 A6NJR5 290 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 CABYRO75952 493 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 CCND2P30279 289 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 BMP8BP34820 402 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 CPT1AP50416 773 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 MRPS9P82933 396 aaKnown RBP21.63■■□□□ 1.05
HDAC4-217ENST00000553145 UBE2SQ16763 222 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 SLC43A3Q8NBI5 491 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 CUL5Q93034 780 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 TOX2Q96NM4 488 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 PSTPIP2Q9H939 334 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 PRKAG2Q9UGJ0 569 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 CYP46A1Q9Y6A2 500 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 MRVI1Q9Y6F6 885 aa21.63■■□□□ 1.05
HDAC4-217ENST00000553145 GH1P01241 217 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 MYL3P08590 195 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 ITGB8P26012 769 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 EVCP57679 992 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 PURAQ00577 322 aaKnown RBP21.62■■□□□ 1.05
HDAC4-217ENST00000553145 ITGA7Q13683 1181 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 FAM126BQ8IXS8 530 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 POLR3EQ9NVU0 708 aa21.62■■□□□ 1.05
HDAC4-217ENST00000553145 TRIOBPQ9H2D6 2365 aa21.61■■□□□ 1.05
HDAC4-217ENST00000553145 STXBP3O00186 592 aa21.61■■□□□ 1.05
HDAC4-217ENST00000553145 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
HDAC4-217ENST00000553145 AFG1LQ8WV93 481 aa21.61■■□□□ 1.05
HDAC4-217ENST00000553145 LARP6Q9BRS8 491 aaKnown RBP21.61■■□□□ 1.05
HDAC4-217ENST00000553145 UBE2OQ9C0C9 1292 aaKnown RBP21.61■■□□□ 1.05
HDAC4-217ENST00000553145 MROH7Q68CQ1 1323 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 CCDC196A0A1B0GTZ2 297 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 DCDC2CA8MYV0 355 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 KIAA0355O15063 1070 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 SEC24BO95487 1268 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 MMP3P08254 477 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 FXR1P51114 621 aaKnown RBP eCLIP21.6■■□□□ 1.05
HDAC4-217ENST00000553145 NAPAP54920 295 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 BADQ92934 168 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 LBHD1Q9BQE6 289 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-217ENST00000553145 NCOA5Q9HCD5 579 aaKnown RBP21.6■■□□□ 1.05
HDAC4-217ENST00000553145 TMEM39AQ9NV64 488 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 TBX21Q9UL17 535 aa21.6■■□□□ 1.05
HDAC4-217ENST00000553145 A0A1W2PPC1 479 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 SORBS3O60504 671 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 CCT2P78371 535 aaKnown RBP21.59■■□□□ 1.05
HDAC4-217ENST00000553145 SP2Q02086 613 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 NTRK3Q16288 839 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
HDAC4-217ENST00000553145 PPP1R18Q6NYC8 613 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 PPP1R13LQ8WUF5 828 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 INPP4AQ96PE3 977 aaPredicted RBP21.59■■□□□ 1.05
HDAC4-217ENST00000553145 MTG1Q9BT17 334 aaPredicted RBP21.59■■□□□ 1.05
HDAC4-217ENST00000553145 BARHL2Q9NY43 387 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 RTEL1Q9NZ71 1219 aa21.59■■□□□ 1.05
HDAC4-217ENST00000553145 RANBP2P49792 3224 aaKnown RBP21.59■■□□□ 1.05
HDAC4-217ENST00000553145 SCN10AQ9Y5Y9 1956 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 hCG_1984214I3L0E3 225 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 PPFIA3O75145 1194 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 CD4P01730 458 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 UBA1P22314 1058 aaKnown RBP21.58■■□□□ 1.05
HDAC4-217ENST00000553145 SEMA3FQ13275 785 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 PFKFB3Q16875 520 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-217ENST00000553145 PCNX4Q63HM2 1172 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 ZNF713Q8N859 430 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-217ENST00000553145 PHKBQ93100 1093 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 EMID1Q96A84 441 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-217ENST00000553145 PDRG1Q9NUG6 133 aa21.58■■□□□ 1.05
HDAC4-217ENST00000553145 GGPS1O95749 300 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 SCG2P13521 617 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 PKN1Q16512 942 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 KCNV1Q6PIU1 500 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 DHX37Q8IY37 1157 aaKnown RBP21.57■■□□□ 1.04
HDAC4-217ENST00000553145 BCAS3Q9H6U6 928 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 RIC8AQ9NPQ8 531 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 PCDHA6Q9UN73 950 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 PCDHA8Q9Y5H6 950 aa21.57■■□□□ 1.04
HDAC4-217ENST00000553145 TLR3O15455 904 aaKnown RBP21.56■■□□□ 1.04
HDAC4-217ENST00000553145 PRPF3O43395 683 aaKnown RBP21.56■■□□□ 1.04
HDAC4-217ENST00000553145 B4GALT4O60513 344 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 KPNA6O60684 536 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 STAM2O75886 525 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 RAG1P15918 1043 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 ICAM3P32942 547 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 ADCY7P51828 1080 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 ANAPC15P60006 121 aa21.56■■□□□ 1.04
HDAC4-217ENST00000553145 CELF3Q5SZQ8 465 aaKnown RBP21.56■■□□□ 1.04
HDAC4-217ENST00000553145 MYSM1Q5VVJ2 828 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms