RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 EPHX3Q9H6B9 360 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 MTCH2Q9Y6C9 303 aa13.18□□□□□ -0.3
TMEM116-218ENST00000552839 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-218ENST00000552839 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 CA3P07451 260 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 FDX1P10109 184 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 POU3F3P20264 500 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-218ENST00000552839 METAP2P50579 478 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM116-218ENST00000552839 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 SEC23AQ15436 765 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 KRT40Q6A162 431 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 IQSEC1Q6DN90 963 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 CPLX2Q6PUV4 134 aaKnown RBP13.17□□□□□ -0.3
TMEM116-218ENST00000552839 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 LRFN3Q9BTN0 628 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-218ENST00000552839 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 Q9Y3F1 56 aa13.17□□□□□ -0.3
TMEM116-218ENST00000552839 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-218ENST00000552839 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 CPLX1O14810 134 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 CYP2C9P11712 490 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 GNAQP50148 359 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 STAT2P52630 851 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 AK2P54819 239 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 STK3Q13188 491 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 RTN1Q16799 776 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
TMEM116-218ENST00000552839 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 DEFB128Q7Z7B8 93 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-218ENST00000552839 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 MYL10Q9BUA6 226 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
TMEM116-218ENST00000552839 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-218ENST00000552839 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
TMEM116-218ENST00000552839 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
TMEM116-218ENST00000552839 SCN10AQ9Y5Y9 1956 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
TMEM116-218ENST00000552839 TLL1O43897 1013 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 PFKMP08237 780 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 PDHBP11177 359 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 ALAS1P13196 640 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 RXRAP19793 462 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 MCM2P49736 904 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 MUM1L1Q5H9M0 696 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 CHURC1Q8WUH1 139 aa13.15□□□□□ -0.3
TMEM116-218ENST00000552839 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
TMEM116-218ENST00000552839 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
TMEM116-218ENST00000552839 TANC1Q9C0D5 1861 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 SUPT20HL2P0C7V6 817 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 SNAP25P60880 206 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
TMEM116-218ENST00000552839 GRM4Q14833 912 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 KHSRPQ92945 711 aaKnown RBP eCLIP13.14□□□□□ -0.318e-7■■□□□ 12.4
TMEM116-218ENST00000552839 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
TMEM116-218ENST00000552839 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
TMEM116-218ENST00000552839 SENP2Q9HC62 589 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 COG5Q9UP83 839 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
TMEM116-218ENST00000552839 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-218ENST00000552839 CDKL5O76039 1030 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 NOVP48745 357 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 RCAN1P53805 252 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 PURAQ00577 322 aaKnown RBP13.13□□□□□ -0.31
TMEM116-218ENST00000552839 TAP1Q03518 808 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-218ENST00000552839 DUSP28Q4G0W2 176 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 TMEM31Q5JXX7 168 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-218ENST00000552839 SLC9A7Q96T83 725 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 SEC63Q9UGP8 760 aaKnown RBP13.13□□□□□ -0.31
TMEM116-218ENST00000552839 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 HCN4Q9Y3Q4 1203 aa13.13□□□□□ -0.31
TMEM116-218ENST00000552839 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
TMEM116-218ENST00000552839 PLA2G6O60733 806 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms