RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 STAM2O75886 525 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 CCND2P30279 289 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 TECP42680 631 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 INHBEP58166 350 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 CEP55Q53EZ4 464 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 SLC30A10Q6XR72 485 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 RBM43Q6ZSC3 357 aaKnown RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 NIPA1Q7RTP0 329 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 CABP7Q86V35 215 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 PLA2G4DQ86XP0 818 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 RASAL3Q86YV0 1011 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 IGSF22Q8N9C0 903 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 SHCBP1Q8NEM2 672 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 NSUN6Q8TEA1 469 aaKnown RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 EPSTI1Q96J88 318 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 RMDN3Q96TC7 470 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 MXRA8Q9BRK3 442 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 MROH8Q9H579 483 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 MAGEF1Q9HAY2 307 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 ZCCHC17Q9NP64 241 aaKnown RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
LINC00661-206ENST00000552608 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
LINC00661-206ENST00000552608 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 KIF3CO14782 793 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 EDIL3O43854 480 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 TOMM70O94826 608 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 BCRP11274 1271 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 STAT6P42226 847 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 UBXN2AP68543 259 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 PGM5Q15124 567 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 IL17AQ16552 155 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 L1TD1Q5T7N2 865 aaKnown RBP12.33□□□□□ -0.44
LINC00661-206ENST00000552608 RRAGBQ5VZM2 374 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 HAUS3Q68CZ6 603 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 SAPCD2Q86UD0 394 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 NLRX1Q86UT6 975 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 PDILTQ8N807 584 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 CCDC102AQ96A19 550 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 DHX58Q96C10 678 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 TAAR1Q96RJ0 339 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 PDCD2LQ9BRP1 358 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
LINC00661-206ENST00000552608 PXMP2Q9NR77 195 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 CYP39A1Q9NYL5 469 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 TCEAL9Q9UHQ7 104 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 SERTAD1Q9UHV2 236 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 LOXHD1Q8IVV2 1947 aa12.33□□□□□ -0.44
LINC00661-206ENST00000552608 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 MAFGO15525 162 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 CNMDO75829 334 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 SMC2O95347 1197 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 CAVIN2O95810 425 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 MYCLP12524 364 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 EIF2AK2P19525 551 aaKnown RBP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 ERVK-24P63145 666 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 KCTD2Q14681 263 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 GNPTABQ3T906 1256 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 ETNPPLQ8TBG4 499 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 SNX29Q8TEQ0 813 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 HAS1Q92839 578 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 IWS1Q96ST2 819 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 LRRC27Q9C0I9 530 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 NT5C3AQ9H0P0 336 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 LCTP09848 1927 aa12.32□□□□□ -0.44
LINC00661-206ENST00000552608 ZNFX1Q9P2E3 1918 aaKnown RBP12.32□□□□□ -0.44
LINC00661-206ENST00000552608 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 TMEM88BA6NKF7 163 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 MEIS1O00470 390 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 MSH4O15457 936 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 ACTN4O43707 911 aaKnown RBP12.31□□□□□ -0.44
LINC00661-206ENST00000552608 MYL1P05976 194 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 SLC10A3P09131 477 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 ERCC3P19447 782 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 FSTL1Q12841 308 aa12.31□□□□□ -0.44
LINC00661-206ENST00000552608 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms