RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 LINC01553A4QN01 128 aa19.82■□□□□ 0.76
CACNB3-222ENST00000552465 CHST3Q7LGC8 479 aa19.82■□□□□ 0.76
CACNB3-222ENST00000552465 UBE2ZQ9H832 354 aaPredicted RBP19.82■□□□□ 0.76
CACNB3-222ENST00000552465 HDAC6Q9UBN7 1215 aa19.82■□□□□ 0.76
CACNB3-222ENST00000552465 PCDHB15Q9Y5E8 787 aa19.82■□□□□ 0.76
CACNB3-222ENST00000552465 TRANK1O15050 2925 aa19.82■□□□□ 0.76
CACNB3-222ENST00000552465 SALL3Q9BXA9 1300 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 EFCAB14O75071 495 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 GOLGA8HP0CJ92 632 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 IKBKEQ14164 716 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 DGKDQ16760 1214 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 GPATCH4Q5T3I0 446 aaKnown RBP19.81■□□□□ 0.76
CACNB3-222ENST00000552465 C7orf31Q8N865 590 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 SYTL5Q8TDW5 730 aaPredicted RBP19.81■□□□□ 0.76
CACNB3-222ENST00000552465 NSUN6Q8TEA1 469 aaKnown RBP19.81■□□□□ 0.76
CACNB3-222ENST00000552465 UBA5Q9GZZ9 404 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 COL20A1Q9P218 1284 aa19.81■□□□□ 0.76
CACNB3-222ENST00000552465 PSEN2P49810 448 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 PTK7Q13308 1070 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 STXBP2Q15833 593 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 LEXMQ3ZCV2 418 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 MCMDC2Q4G0Z9 681 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 TRAF7Q6Q0C0 670 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 FAM178BQ8IXR5 827 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 FAM227BQ96M60 508 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 IWS1Q96ST2 819 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 ALG1Q9BT22 464 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 CPVLQ9H3G5 476 aa19.8■□□□□ 0.76
CACNB3-222ENST00000552465 DDX41Q9UJV9 622 aaKnown RBP19.8■□□□□ 0.76
CACNB3-222ENST00000552465 HSPD1P10809 573 aaKnown RBP19.79■□□□□ 0.76
CACNB3-222ENST00000552465 HAND2P61296 217 aa19.79■□□□□ 0.76
CACNB3-222ENST00000552465 TRIM71Q2Q1W2 868 aaKnown RBP19.79■□□□□ 0.76
CACNB3-222ENST00000552465 FAM117BQ6P1L5 589 aa19.79■□□□□ 0.76
CACNB3-222ENST00000552465 MFSD6Q6ZSS7 791 aa19.79■□□□□ 0.76
CACNB3-222ENST00000552465 GJD3Q8N144 294 aa19.79■□□□□ 0.76
CACNB3-222ENST00000552465 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.79■□□□□ 0.76
CACNB3-222ENST00000552465 EMID1Q96A84 441 aaPredicted RBP19.79■□□□□ 0.76
CACNB3-222ENST00000552465 CRBNQ96SW2 442 aa19.79■□□□□ 0.76
CACNB3-222ENST00000552465 ABCB11O95342 1321 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 ZMYM6O95789 1325 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 COL4A4P53420 1690 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-222ENST00000552465 A0A0D9SFI3 127 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 RBAK-RBAKDNI3L0D1 243 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 HAS3O00219 553 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 PCP11498 1178 aaKnown RBP19.78■□□□□ 0.76
CACNB3-222ENST00000552465 KCNA5P22460 613 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 MBTPS1Q14703 1052 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 MFSD10Q14728 455 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 CDC37Q16543 378 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-222ENST00000552465 ZNF618Q5T7W0 954 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 MCF2L2Q86YR7 1114 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 WNT8BQ93098 351 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 RMDN3Q96TC7 470 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 KATNAL1Q9BW62 490 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 PTPRSQ13332 1948 aa19.78■□□□□ 0.76
CACNB3-222ENST00000552465 TRIP12Q14669 1992 aaPredicted RBP19.77■□□□□ 0.76
CACNB3-222ENST00000552465 PRR33A8MZF0 331 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 EIF3JO75822 258 aaKnown RBP19.77■□□□□ 0.76
CACNB3-222ENST00000552465 F2P00734 622 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 LAMC2Q13753 1193 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 KIAA0753Q2KHM9 967 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
CACNB3-222ENST00000552465 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.77■□□□□ 0.76
CACNB3-222ENST00000552465 DGKHQ86XP1 1220 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 TBC1D10CQ8IV04 446 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 INSL6Q9Y581 213 aa19.77■□□□□ 0.76
CACNB3-222ENST00000552465 LGR5O75473 907 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 ZNF200P98182 395 aaPredicted RBP19.76■□□□□ 0.75
CACNB3-222ENST00000552465 ARHGEF16Q5VV41 709 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 ZNF589Q86UQ0 364 aaPredicted RBP19.76■□□□□ 0.75
CACNB3-222ENST00000552465 ADGRF4Q8IZF3 695 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 FBXO22Q8NEZ5 403 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 PPTC7Q8NI37 304 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 ZKSCAN3Q9BRR0 538 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 C17orf80Q9BSJ5 609 aa19.76■□□□□ 0.75
CACNB3-222ENST00000552465 NR3C2P08235 984 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 ZNF286BP0CG31 522 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 IL9P15248 144 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 EIF2AK2P19525 551 aaKnown RBP19.75■□□□□ 0.75
CACNB3-222ENST00000552465 SSTR3P32745 418 aaPredicted RBP19.75■□□□□ 0.75
CACNB3-222ENST00000552465 ANKRD45Q5TZF3 282 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 PTCRAQ6ISU1 281 aaPredicted RBP19.75■□□□□ 0.75
CACNB3-222ENST00000552465 TICAM2Q86XR7 235 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 ESR2Q92731 530 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 RNF41Q9H4P4 317 aaPredicted RBP19.75■□□□□ 0.75
CACNB3-222ENST00000552465 MRPL11Q9Y3B7 192 aaKnown RBP19.75■□□□□ 0.75
CACNB3-222ENST00000552465 MRVI1Q9Y6F6 885 aa19.75■□□□□ 0.75
CACNB3-222ENST00000552465 GRXCR2A6NFK2 248 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 PPFIA4O75335 1185 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 AMHP03971 560 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-222ENST00000552465 PDE1AP54750 535 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 HTRA4P83105 476 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-222ENST00000552465 NMIQ13287 307 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-222ENST00000552465 MKRN4PQ13434 485 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-222ENST00000552465 HIC1Q14526 733 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 QRICH1Q2TAL8 776 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 DHX37Q8IY37 1157 aaKnown RBP19.74■□□□□ 0.75
CACNB3-222ENST00000552465 PNMA1Q8ND90 353 aa19.74■□□□□ 0.75
CACNB3-222ENST00000552465 DBF4BQ8NFT6 615 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms