RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 ADD1P35611 737 aaKnown RBP19.28■□□□□ 0.68
BRF1-219ENST00000551787 FXR1P51114 621 aaKnown RBP eCLIP19.28■□□□□ 0.68
BRF1-219ENST00000551787 FUT2Q10981 343 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 ITGA7Q13683 1181 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 ANKRD33Q7Z3H0 272 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 SAMD3Q8N6K7 520 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 DDX41Q9UJV9 622 aaKnown RBP19.28■□□□□ 0.68
BRF1-219ENST00000551787 MRVI1Q9Y6F6 885 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 MEIS2O14770 477 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.68
BRF1-219ENST00000551787 CABYRO75952 493 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 RGS20O76081 388 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 CPT1AP50416 773 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 CHMP4BP1P59074 171 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 AFG1LQ8WV93 481 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 CUL5Q93034 780 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 TOX2Q96NM4 488 aa19.27■□□□□ 0.68
BRF1-219ENST00000551787 LARP6Q9BRS8 491 aaKnown RBP19.27■□□□□ 0.68
BRF1-219ENST00000551787 CNTNAP5Q8WYK1 1306 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 A6NJR5 290 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 PPFIA3O75145 1194 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 GH1P01241 217 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 RAG1P15918 1043 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 CCND2P30279 289 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 METAP2P50579 478 aaKnown RBP eCLIP19.26■□□□□ 0.67
BRF1-219ENST00000551787 ARHGAP1Q07960 439 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 UBE2SQ16763 222 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 RUFY3Q7L099 469 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 UPF3BQ9BZI7 483 aaKnown RBP19.26■□□□□ 0.67
BRF1-219ENST00000551787 ZSWIM6Q9HCJ5 1215 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
BRF1-219ENST00000551787 KIAA0355O15063 1070 aa19.25■□□□□ 0.67
BRF1-219ENST00000551787 MRPS9P82933 396 aaKnown RBP19.25■□□□□ 0.67
BRF1-219ENST00000551787 PURAQ00577 322 aaKnown RBP19.25■□□□□ 0.67
BRF1-219ENST00000551787 BRDTQ58F21 947 aaPredicted RBP19.25■□□□□ 0.67
BRF1-219ENST00000551787 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
BRF1-219ENST00000551787 MTG1Q9BT17 334 aaPredicted RBP19.25■□□□□ 0.67
BRF1-219ENST00000551787 TRPV6Q9H1D0 765 aa19.25■□□□□ 0.67
BRF1-219ENST00000551787 POLR3EQ9NVU0 708 aa19.25■□□□□ 0.67
BRF1-219ENST00000551787 CYP46A1Q9Y6A2 500 aa19.25■□□□□ 0.67
BRF1-219ENST00000551787 SZT2Q5T011 3432 aa19.25■□□□□ 0.67
BRF1-219ENST00000551787 PIK3CDO00329 1044 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 EPB41L2O43491 1005 aaKnown RBP19.24■□□□□ 0.67
BRF1-219ENST00000551787 SP2Q02086 613 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 TYW1BQ6NUM6 668 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 FAM126BQ8IXS8 530 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 TDHQ8IZJ6 230 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 SLC43A3Q8NBI5 491 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 BCAS3Q9H6U6 928 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 MROH7Q68CQ1 1323 aa19.24■□□□□ 0.67
BRF1-219ENST00000551787 SOX1O00570 391 aaPredicted RBP19.23■□□□□ 0.67
BRF1-219ENST00000551787 NAPAP54920 295 aa19.23■□□□□ 0.67
BRF1-219ENST00000551787 CCT2P78371 535 aaKnown RBP19.23■□□□□ 0.67
BRF1-219ENST00000551787 FAM47CQ5HY64 1035 aa19.23■□□□□ 0.67
BRF1-219ENST00000551787 DHX37Q8IY37 1157 aaKnown RBP19.23■□□□□ 0.67
BRF1-219ENST00000551787 PPP1R12CQ9BZL4 782 aa19.23■□□□□ 0.67
BRF1-219ENST00000551787 TBX21Q9UL17 535 aa19.23■□□□□ 0.67
BRF1-219ENST00000551787 LAMA2P24043 3122 aaKnown RBP19.23■□□□□ 0.67
BRF1-219ENST00000551787 CCDC196A0A1B0GTZ2 297 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 A0A1W2PPC1 479 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 KPNA6O60684 536 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 PDIA3P30101 505 aaKnown RBP19.22■□□□□ 0.67
BRF1-219ENST00000551787 RCAN1P53805 252 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 LAMC2Q13753 1193 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 TOB2Q14106 344 aaPredicted RBP19.22■□□□□ 0.67
BRF1-219ENST00000551787 NBPF20Q3BBV1 942 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 FBXL16Q8N461 479 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 AGXT2Q9BYV1 514 aa19.22■□□□□ 0.67
BRF1-219ENST00000551787 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
BRF1-219ENST00000551787 TRMT13Q9NUP7 481 aaKnown RBP19.22■□□□□ 0.67
BRF1-219ENST00000551787 STXBP3O00186 592 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 TLR3O15455 904 aaKnown RBP19.21■□□□□ 0.67
BRF1-219ENST00000551787 B4GALT4O60513 344 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 TIMP1P01033 207 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 CD4P01730 458 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 MMP3P08254 477 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 EPHB4P54760 987 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 SHHQ15465 462 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 C9orf50Q5SZB4 431 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 CELF3Q5SZQ8 465 aaKnown RBP19.21■□□□□ 0.67
BRF1-219ENST00000551787 MYSM1Q5VVJ2 828 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 PHKBQ93100 1093 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 LRCH3Q96II8 777 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 TM6SF1Q9BZW5 370 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 FRMPD4Q14CM0 1322 aa19.21■□□□□ 0.67
BRF1-219ENST00000551787 SMCO2A6NFE2 343 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 SPDYE3A6NKU9 549 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 SEC24BO95487 1268 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 GGPS1O95749 300 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 UBA1P22314 1058 aaKnown RBP19.2■□□□□ 0.66
BRF1-219ENST00000551787 CYP2C18P33260 490 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 PGBD1Q96JS3 809 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 SPATA33Q96N06 139 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 ALDH8A1Q9H2A2 487 aaPredicted RBP19.2■□□□□ 0.66
BRF1-219ENST00000551787 PDRG1Q9NUG6 133 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 PCDHA6Q9UN73 950 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 PCDHA8Q9Y5H6 950 aa19.2■□□□□ 0.66
BRF1-219ENST00000551787 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms