RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	SMAD3	P84022	425 aa	Known RBP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	ARHGAP1	Q07960	439 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	PPIG	Q13427	754 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	NBPF20	Q3BBV1	942 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	BRDT	Q58F21	947 aa	Predicted RBP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	TMEM240	Q5SV17	173 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	NFXL1	Q6ZNB6	911 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	VSIG10L	Q86VR7	867 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	FBXL16	Q8N461	479 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	CTCFL	Q8NI51	663 aa	Predicted RBP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	RNPC3	Q96LT9	517 aa	Known RBP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	PDCD2L	Q9BRP1	358 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	NOC4L	Q9BVI4	516 aa	Known RBP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	HIPK3	Q9H422	1215 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	SLC12A7	Q9Y666	1083 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	UMODL1	Q5DID0	1318 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	RGS20	O76081	388 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	GH1	P01241	217 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	SUPT20HL2	P0C7V6	817 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	POLR2M	P0CAP2	368 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	ACR	P10323	421 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	MYCL	P12524	364 aa	Predicted RBP	11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	PGM5	Q15124	567 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	RASIP1	Q5U651	963 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	NFRKB	Q6P4R8	1299 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	SYNE3	Q6ZMZ3	975 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	ZNF365	Q70YC5	407 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	SRBD1	Q8N5C6	995 aa	Known RBP	11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	PPP1R13L	Q8WUF5	828 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	AFG1L	Q8WV93	481 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	PIBF1	Q8WXW3	757 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	SPZ1	Q9BXG8	430 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	SEMA6B	Q9H3T3	888 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	TRMT13	Q9NUP7	481 aa	Known RBP	11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	STXBP5L	Q9Y2K9	1186 aa		11.16	□□□□□ -0.62
PFKM-222	ENST00000551339	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	MMP3	P08254	477 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	CYP2C9	P11712	490 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	RCAN1	P53805	252 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	CCL23	P55773	120 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	BLOC1S2	Q6QNY1	142 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	FCHSD1	Q86WN1	690 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	CMTR1	Q8N1G2	835 aa	Known RBP	11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	FANCB	Q8NB91	859 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	IL31RA	Q8NI17	732 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	KAT2B	Q92831	832 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	EMID1	Q96A84	441 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	VWCE	Q96DN2	955 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	ZFP91	Q96JP5	570 aa	Predicted RBP	11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	FAM161B	Q96MY7	647 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	JAKMIP1	Q96N16	626 aa	Known RBP	11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	GUCD1	Q96NT3	240 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	LRRC2	Q9BYS8	371 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	TM6SF1	Q9BZW5	370 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	WNT8A	Q9H1J5	351 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	IL23A	Q9NPF7	189 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	MRVI1	Q9Y6F6	885 aa		11.15	□□□□□ -0.62
PFKM-222	ENST00000551339	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	MYH6	P13533	1939 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	PLEKHA8P1	O95397	391 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	RXRA	P19793	462 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	CAST	P20810	708 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	RPS6KB1	P23443	525 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	SP2	Q02086	613 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	PTPN11	Q06124	597 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	LAMC2	Q13753	1193 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	ZNF697	Q5TEC3	545 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	KCNV1	Q6PIU1	500 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	APOA5	Q6Q788	366 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	RRP36	Q96EU6	259 aa	Known RBP	11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	AGXT2	Q9BYV1	514 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	TTYH1	Q9H313	450 aa	Predicted RBP	11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	ZSWIM6	Q9HCJ5	1215 aa		11.14	□□□□□ -0.63
PFKM-222	ENST00000551339	PIK3CD	O00329	1044 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	MEIS2	O14770	477 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	FGB	P02675	491 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	TGFB3	P10600	412 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	CCND2	P30279	289 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	ANAPC15	P60006	121 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	MRPS9	P82933	396 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	FGD1	P98174	961 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	DGKD	Q16760	1214 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	FAM47C	Q5HY64	1035 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	CELF3	Q5SZQ8	465 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	MYSM1	Q5VVJ2	828 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	RAB11FIP4	Q86YS3	637 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	DHX37	Q8IY37	1157 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	PPTC7	Q8NI37	304 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	HERVK_113	Q902F9	699 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	SCLY	Q96I15	445 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	TCEANC2	Q96MN5	208 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	CDX2	Q99626	313 aa	Predicted RBP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	RBM28	Q9NW13	759 aa	Known RBP	11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	BRPF3	Q9ULD4	1205 aa		11.13	□□□□□ -0.63
PFKM-222	ENST00000551339	FRMPD4	Q14CM0	1322 aa		11.12	□□□□□ -0.63

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