RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 TTLL4Q14679 1199 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 LY6KQ17RY6 165 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 DUSP28Q4G0W2 176 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 GNASQ5JWF2 1037 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 CCDC12Q8WUD4 166 aaPredicted RBP15.76■□□□□ 0.11
TROAP-213ENST00000550709 DPF3Q92784 378 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 C6orf50Q9HD87 102 aa15.76■□□□□ 0.11
TROAP-213ENST00000550709 SORBS3O60504 671 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 DEXIO95424 95 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 COL6A1P12109 1028 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 GJA9P57773 515 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 MRPS9P82933 396 aaKnown RBP15.75■□□□□ 0.11
TROAP-213ENST00000550709 KCNA10Q16322 511 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 FSCN1Q16658 493 aaKnown RBP15.75■□□□□ 0.11
TROAP-213ENST00000550709 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 KLHDC9Q8NEP7 349 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 OR6J1Q8NGC5 347 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 HTATIP2Q9BUP3 242 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
TROAP-213ENST00000550709 ORC3Q9UBD5 711 aaPredicted RBP15.75■□□□□ 0.11
TROAP-213ENST00000550709 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
TROAP-213ENST00000550709 PLXNA1Q9UIW2 1896 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 RGS20O76081 388 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 NLRP5P59047 1200 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 CCDC62Q6P9F0 684 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 CCDC83Q8IWF9 413 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 RASGRP4Q8TDF6 673 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 VTI1AQ96AJ9 217 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 ZMYND12Q9H0C1 365 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 GLT8D2Q9H1C3 349 aa15.74■□□□□ 0.11
TROAP-213ENST00000550709 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 CTAGE5O15320 804 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 ST18O60284 1047 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 JAK2O60674 1132 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 GNA11P29992 359 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 ACLYP53396 1101 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 ST3GAL1Q11201 340 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 REXO1Q8N1G1 1221 aaKnown RBP15.73■□□□□ 0.11
TROAP-213ENST00000550709 CCDC148Q8NFR7 591 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 ANO3Q9BYT9 981 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 EHMT1Q9H9B1 1298 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 PHF24Q9UPV7 400 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 Q9Y3F1 56 aa15.73■□□□□ 0.11
TROAP-213ENST00000550709 NKRFO15226 690 aaKnown RBP eCLIP15.72■□□□□ 0.11
TROAP-213ENST00000550709 FOSP01100 380 aaPredicted RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 ASGR1P07306 291 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 FOSBP53539 338 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 LRRC26Q2I0M4 334 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 GNPTABQ3T906 1256 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 CCSAPQ6IQ19 270 aaPredicted RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 CXCL17Q6UXB2 119 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 PCSK9Q8NBP7 692 aaKnown RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 ZSCAN31Q96LW9 406 aaPredicted RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 TSEN34Q9BSV6 310 aaKnown RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 GJB4Q9NTQ9 266 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
TROAP-213ENST00000550709 KCNJ14Q9UNX9 436 aa15.72■□□□□ 0.11
TROAP-213ENST00000550709 MCM3APO60318 1980 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 LCTP09848 1927 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 A0A1W2PQ45 241 aaPredicted RBP15.71■□□□□ 0.11
TROAP-213ENST00000550709 A0A1W2PQY0 241 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 ZEB2O60315 1214 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 EVI5O60447 810 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 GH1P01241 217 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 MYL3P08590 195 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 CST5P28325 142 aaPredicted RBP15.71■□□□□ 0.11
TROAP-213ENST00000550709 CLK2P49760 499 aaKnown RBP15.71■□□□□ 0.11
TROAP-213ENST00000550709 AP3B2Q13367 1082 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 XRRA1Q6P2D8 792 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 BICD2Q8TD16 824 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 AFG1LQ8WV93 481 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 INPP4AQ96PE3 977 aaPredicted RBP15.71■□□□□ 0.11
TROAP-213ENST00000550709 ALG1Q9BT22 464 aa15.71■□□□□ 0.11
TROAP-213ENST00000550709 SH2B1Q9NRF2 756 aaPredicted RBP15.71■□□□□ 0.11
TROAP-213ENST00000550709 STK36Q9NRP7 1315 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 MOXD2PA6NHM9 499 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 STAM2O75886 525 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
TROAP-213ENST00000550709 FDPSP14324 419 aaKnown RBP15.7■□□□□ 0.1
TROAP-213ENST00000550709 ITGB5P18084 799 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 CPT1AP50416 773 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 ARHGAP4P98171 946 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 SP2Q02086 613 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 ARHGAP1Q07960 439 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
TROAP-213ENST00000550709 KCNV1Q6PIU1 500 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 SLC39A5Q6ZMH5 540 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 NLRX1Q86UT6 975 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 TEX2Q8IWB9 1127 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 DHX37Q8IY37 1157 aaKnown RBP15.7■□□□□ 0.1
TROAP-213ENST00000550709 C7orf61Q8IZ16 206 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 WASF1Q92558 559 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 BCAS3Q9H6U6 928 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 STARD7Q9NQZ5 370 aa15.7■□□□□ 0.1
TROAP-213ENST00000550709 PKD2L1Q9P0L9 805 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms