RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TUBB4BP68371 445 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 GABPB1Q06547 395 aaPredicted RBP13.41□□□□□ -0.26
NR4A1-215ENST00000550557 RESTQ13127 1097 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 AP3B2Q13367 1082 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 TEX13BQ9BXU2 312 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 AGTPBP1Q9UPW5 1226 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 KRT86O43790 486 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 LONP1P36776 959 aaKnown RBP13.41□□□□□ -0.26
NR4A1-215ENST00000550557 CXCL9Q07325 125 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 FAM26FQ5R3K3 315 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 GTF2A2P52657 109 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 ARPP19P56211 112 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 ELF2Q15723 593 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 RCOR1Q9UKL0 485 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 PCDHA7Q9UN72 937 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 A0A1W2PQ27 194 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 A0A1W2PQ64 194 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 A0A1W2PQD8 194 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 SPOPO43791 374 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 GAS8O95995 478 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 XRCC5P13010 732 aaKnown RBP13.41□□□□□ -0.26
NR4A1-215ENST00000550557 IL25Q9H293 177 aa13.41□□□□□ -0.26
NR4A1-215ENST00000550557 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 PRPF3O43395 683 aaKnown RBP13.4□□□□□ -0.26
NR4A1-215ENST00000550557 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 KIAA1524Q8TCG1 905 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 DDX12PQ92771 950 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 C1orf112Q9NSG2 853 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 WDR46O15213 610 aaKnown RBP13.4□□□□□ -0.26
NR4A1-215ENST00000550557 CCDC175P0C221 793 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 ZFP91Q96JP5 570 aaPredicted RBP13.4□□□□□ -0.26
NR4A1-215ENST00000550557 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
NR4A1-215ENST00000550557 ATP2A1O14983 1001 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 ARHGAP44Q17R89 818 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 CFAP58Q5T655 872 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
NR4A1-215ENST00000550557 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
NR4A1-215ENST00000550557 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
NR4A1-215ENST00000550557 CMA1P23946 247 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 FCGRTP55899 365 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 FOXP1Q9H334 677 aaPredicted RBP13.39□□□□□ -0.27
NR4A1-215ENST00000550557 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 TNS2Q63HR2 1409 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 DENND3A2RUS2 1198 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 GNA14O95837 355 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 MYZAPP0CAP1 466 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 PFKFB1P16118 471 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 TNNC1P63316 161 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 FANCCQ00597 558 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 SLFNL1Q499Z3 407 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 GJA10Q969M2 543 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 MRFAP1L1Q96HT8 127 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 CPVLQ9H3G5 476 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 HAUS2Q9NVX0 235 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 ARMCX3Q9UH62 379 aaPredicted RBP13.39□□□□□ -0.27
NR4A1-215ENST00000550557 HDLBPQ00341 1268 aaKnown RBP13.39□□□□□ -0.27
NR4A1-215ENST00000550557 ASIC2Q16515 512 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 CNGA4Q8IV77 575 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 NELFBQ8WX92 580 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 JAKMIP2Q96AA8 810 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 CCDC114Q96M63 670 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 PCDHA6Q9UN73 950 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 PCDHA8Q9Y5H6 950 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 MEGF6O75095 1541 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 C3P01024 1663 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 CTNND1O60716 968 aaKnown RBP13.39□□□□□ -0.27
NR4A1-215ENST00000550557 JAK3P52333 1124 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
NR4A1-215ENST00000550557 STK25O00506 426 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 LRRC8AQ8IWT6 810 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 FLT1P17948 1338 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 CEP112Q8N8E3 955 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 TCP11Q8WWU5 503 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 CDC25BP30305 580 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 RSRC2Q7L4I2 434 aaKnown RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 SPATA33Q96N06 139 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 MEIS1O00470 390 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 ABCD1P33897 745 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 MMP14P50281 582 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 TWF2Q6IBS0 349 aaKnown RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 ANKRD36BP1Q96IX9 119 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms