RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
VDR-208ENST00000550325 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
VDR-208ENST00000550325 GDF3Q9NR23 364 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 ATP8A1Q9Y2Q0 1164 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 SPATA5Q8NB90 893 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 CABLES1Q8TDN4 633 aa13.33□□□□□ -0.28
VDR-208ENST00000550325 CYP7A1P22680 504 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 C6orf89Q6UWU4 347 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 EGFL6Q8IUX8 553 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 NDST4Q9H3R1 872 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
VDR-208ENST00000550325 NWD2Q9ULI1 1742 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 NMT2O60551 498 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 PCCAP05165 728 aaPredicted RBP13.32□□□□□ -0.28
VDR-208ENST00000550325 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
VDR-208ENST00000550325 INF2Q27J81 1249 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 LMBR1Q8WVP7 490 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 TBX22Q9Y458 520 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 TRIM37O94972 964 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 CCNE1P24864 410 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 EVA1CP58658 441 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 IRX1P78414 480 aaPredicted RBP13.32□□□□□ -0.28
VDR-208ENST00000550325 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
VDR-208ENST00000550325 ENAHQ8N8S7 591 aaPredicted RBP13.32□□□□□ -0.28
VDR-208ENST00000550325 MGARPQ8TDB4 240 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 SAMD15Q9P1V8 674 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 PNMA2Q9UL42 364 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
VDR-208ENST00000550325 DIP2AQ14689 1571 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 DAPK3O43293 454 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 ERVK-9P63128 1117 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 TTYH3Q9C0H2 523 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
VDR-208ENST00000550325 ADAMTS1Q9UHI8 967 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 KLRC1P26715 233 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 FLT3P36888 993 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 LRRC41Q15345 812 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 RPS6KA1Q15418 735 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 MED1Q15648 1581 aaPredicted RBP13.31□□□□□ -0.28
VDR-208ENST00000550325 KIF2BQ8N4N8 673 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 PARD3BQ8TEW8 1205 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 SAAL1Q96ER3 474 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 CYP27B1O15528 508 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 AP1G2O75843 785 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 PRLRP16471 622 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 EPS15P42566 896 aa13.31□□□□□ -0.28
VDR-208ENST00000550325 POLR2FP61218 127 aaKnown RBP13.31□□□□□ -0.28
VDR-208ENST00000550325 PRCCQ92733 491 aaPredicted RBP13.31□□□□□ -0.28
VDR-208ENST00000550325 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
VDR-208ENST00000550325 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
VDR-208ENST00000550325 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
VDR-208ENST00000550325 ADAMTS2O95450 1211 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 PLCG1P19174 1290 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 SLC9C1Q4G0N8 1177 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 PACSIN1Q9BY11 444 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 TCP11L1Q9NUJ3 509 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 AMACRQ9UHK6 382 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
VDR-208ENST00000550325 SLCO1A2P46721 670 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
VDR-208ENST00000550325 ITIH3Q06033 890 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 RUBCNQ92622 972 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 DHTKD1Q96HY7 919 aaPredicted RBP13.3□□□□□ -0.28
VDR-208ENST00000550325 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
VDR-208ENST00000550325 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 KRIT1O00522 736 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 MMEP08473 750 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 MIIPQ5JXC2 388 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
VDR-208ENST00000550325 ZNF335Q9H4Z2 1342 aaPredicted RBP13.29□□□□□ -0.28
VDR-208ENST00000550325 CCT8L1PA6NM43 557 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 GIMAP8Q8ND71 665 aaPredicted RBP13.29□□□□□ -0.28
VDR-208ENST00000550325 CELF4Q9BZC1 486 aaKnown RBP13.29□□□□□ -0.28
VDR-208ENST00000550325 TRMT112Q9UI30 125 aaKnown RBP13.29□□□□□ -0.28
VDR-208ENST00000550325 RGPD2P0DJD1 1756 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 SCG2P13521 617 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 SFMBT2Q5VUG0 894 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms