RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 RBM12Q9NTZ6 932 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 PCDHA13Q9Y5I0 950 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 ZNF263O14978 683 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 EEF1GP26641 437 aaKnown RBP11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 AARSP49588 968 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 VAV2P52735 878 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 NNTQ13423 1086 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 CFAP58Q5T655 872 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 OSBPL9Q96SU4 736 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 TBC1D7Q9P0N9 293 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 POLLQ9UGP5 575 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 SNX12Q9UMY4 172 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 OPA1O60313 960 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 RPS6KA5O75582 802 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 SRGNP10124 158 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 CHRNA5P30532 468 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 ZBED6P86452 979 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 FUT2Q10981 343 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 ODF2Q5BJF6 829 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 MMS22LQ6ZRQ5 1243 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 DNAAF5Q86Y56 855 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 TRIM58Q8NG06 486 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 ZHX3Q9H4I2 956 aa11.91□□□□□ -0.5
SMARCC2-208ENST00000550150 TXKP42681 527 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 CARSP49589 748 aaKnown RBP11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 SETQ01105 290 aaPredicted RBP11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 P2RX5Q93086 422 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 RPGRIP1Q96KN7 1286 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 EIF3HO15372 352 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 NAALADL2Q58DX5 795 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 FBXO33Q7Z6M2 555 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 CABP7Q86V35 215 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 CREG2Q8IUH2 290 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 ZIM3Q96PE6 472 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 KRT12Q99456 494 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 STIM2Q9P246 746 aa11.9□□□□□ -0.5
SMARCC2-208ENST00000550150 HEXIM1O94992 359 aaKnown RBP11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 FAM153BP0C7A2 387 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 CALM1P0DP23 149 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 CALM2P0DP24 149 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 CALM3P0DP25 149 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 GUCY2CP25092 1073 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 LONP1P36776 959 aaKnown RBP11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 TFAP4Q01664 338 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 TRADDQ15628 312 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 PDS5AQ29RF7 1337 aaKnown RBP11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 FAM153CQ494X1 144 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 CDK5RAP3Q96JB5 506 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 GOLPH3Q9H4A6 298 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 FAM153AQ9UHL3 310 aa11.9□□□□□ -0.51
SMARCC2-208ENST00000550150 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 TARSL2A2RTX5 802 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 UBE4AQ14139 1066 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 TTMPQ5BVD1 217 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 ZNF507Q8TCN5 953 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 RPGRQ92834 1020 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 MYH10P35580 1976 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 E7EVH7 732 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 MARCH6O60337 910 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 PRDX5P30044 214 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 HNRNPH1P31943 449 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 EHHADHQ08426 723 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 DUSP9Q99956 384 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 HYOU1Q9Y4L1 999 aa11.89□□□□□ -0.51
SMARCC2-208ENST00000550150 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 SLC1A4P43007 532 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 IFT88Q13099 833 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 PNMA1Q8ND90 353 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 OR2W6PQ8NHA6 318 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 PYM1Q9BRP8 204 aaKnown RBP11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 CCDC88AQ3V6T2 1871 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 RAD21O60216 631 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 GLI1P08151 1106 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 FECHP22830 423 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 KIF5BP33176 963 aa11.88□□□□□ -0.51
SMARCC2-208ENST00000550150 EPHB4P54760 987 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms