RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 VSIG10LQ86VR7 867 aa29.8■■■□□ 2.36
CPSF6-205ENST00000550075 OR6J1Q8NGC5 347 aa29.8■■■□□ 2.36
CPSF6-205ENST00000550075 FERMT2Q96AC1 680 aa29.8■■■□□ 2.36
CPSF6-205ENST00000550075 LARP6Q9BRS8 491 aaKnown RBP29.8■■■□□ 2.36
CPSF6-205ENST00000550075 SLKQ9H2G2 1235 aaPredicted RBP29.8■■■□□ 2.36
CPSF6-205ENST00000550075 RIC8AQ9NPQ8 531 aa29.8■■■□□ 2.36
CPSF6-205ENST00000550075 CDKL5O76039 1030 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 ATN1P54259 1190 aaPredicted RBP29.79■■■□□ 2.36
CPSF6-205ENST00000550075 LRRC26Q2I0M4 334 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 XRRA1Q6P2D8 792 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 KCNV1Q6PIU1 500 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 IL31RAQ8NI17 732 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 GLT1D1Q96MS3 346 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 MRVI1Q9Y6F6 885 aa29.79■■■□□ 2.36
CPSF6-205ENST00000550075 CEP290O15078 2479 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 CPT1AP50416 773 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 SSRP1Q08945 709 aaKnown RBP29.78■■■□□ 2.36
CPSF6-205ENST00000550075 UBE2SQ16763 222 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 GNPTABQ3T906 1256 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 CCSAPQ6IQ19 270 aaPredicted RBP29.78■■■□□ 2.36
CPSF6-205ENST00000550075 C7orf61Q8IZ16 206 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 CCDC148Q8NFR7 591 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 C22orf23Q9BZE7 217 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 STARD7Q9NQZ5 370 aa29.78■■■□□ 2.36
CPSF6-205ENST00000550075 ASGR1P07306 291 aa29.77■■■□□ 2.36
CPSF6-205ENST00000550075 TYW1BQ6NUM6 668 aa29.77■■■□□ 2.36
CPSF6-205ENST00000550075 SLC39A5Q6ZMH5 540 aa29.77■■■□□ 2.36
CPSF6-205ENST00000550075 TPCN1Q9ULQ1 816 aa29.77■■■□□ 2.36
CPSF6-205ENST00000550075 ESYT2A0FGR8 921 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 SMCO2A6NFE2 343 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 CTAGE5O15320 804 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 CABYRO75952 493 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 FOSP01100 380 aaPredicted RBP29.76■■■□□ 2.35
CPSF6-205ENST00000550075 GH1P01241 217 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 RTP1P59025 263 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 BEX3Q00994 111 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 PCNX4Q63HM2 1172 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 CCDC62Q6P9F0 684 aa29.76■■■□□ 2.35
CPSF6-205ENST00000550075 ELP1O95163 1332 aa29.75■■■□□ 2.35
CPSF6-205ENST00000550075 PFKFB2O60825 505 aa29.75■■■□□ 2.35
CPSF6-205ENST00000550075 SNX17Q15036 470 aa29.75■■■□□ 2.35
CPSF6-205ENST00000550075 TMEM63BQ5T3F8 832 aa29.75■■■□□ 2.35
CPSF6-205ENST00000550075 C6orf50Q9HD87 102 aa29.75■■■□□ 2.35
CPSF6-205ENST00000550075 POLR3EQ9NVU0 708 aa29.75■■■□□ 2.35
CPSF6-205ENST00000550075 ARIH2O95376 493 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 DEXIO95424 95 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 IRX5P78411 483 aaPredicted RBP29.74■■■□□ 2.35
CPSF6-205ENST00000550075 AP3B2Q13367 1082 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 PKN1Q16512 942 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 C1orf53Q5VUE5 145 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 MCTP2Q6DN12 878 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 VTI1AQ96AJ9 217 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 PCDHA6Q9UN73 950 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 ATP11BQ9Y2G3 1177 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 PCDHA8Q9Y5H6 950 aa29.74■■■□□ 2.35
CPSF6-205ENST00000550075 TGFB3P10600 412 aa29.73■■■□□ 2.35
CPSF6-205ENST00000550075 GNA11P29992 359 aa29.73■■■□□ 2.35
CPSF6-205ENST00000550075 RBM25P49756 843 aaKnown RBP29.73■■■□□ 2.35
CPSF6-205ENST00000550075 SCRN1Q12765 414 aa29.73■■■□□ 2.35
CPSF6-205ENST00000550075 INPP4AQ96PE3 977 aaPredicted RBP29.73■■■□□ 2.35
CPSF6-205ENST00000550075 H0YGN5 161 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 PTGS1P23219 599 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 LY6KQ17RY6 165 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 NLRX1Q86UT6 975 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 BICD2Q8TD16 824 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 COPS5Q92905 334 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 ZMYND12Q9H0C1 365 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 SH3GLB2Q9NR46 395 aa29.72■■■□□ 2.35
CPSF6-205ENST00000550075 DDX41Q9UJV9 622 aaKnown RBP29.72■■■□□ 2.35
CPSF6-205ENST00000550075 A0A0U1RQG5 324 aaPredicted RBP29.71■■■□□ 2.35
CPSF6-205ENST00000550075 KPNA6O60684 536 aa29.71■■■□□ 2.35
CPSF6-205ENST00000550075 PPFIA3O75145 1194 aa29.71■■■□□ 2.35
CPSF6-205ENST00000550075 RGS20O76081 388 aa29.71■■■□□ 2.35
CPSF6-205ENST00000550075 MRPS9P82933 396 aaKnown RBP29.71■■■□□ 2.35
CPSF6-205ENST00000550075 CXCL17Q6UXB2 119 aa29.71■■■□□ 2.35
CPSF6-205ENST00000550075 FAM177A1Q8N128 213 aaPredicted RBP29.71■■■□□ 2.35
CPSF6-205ENST00000550075 MROH7Q68CQ1 1323 aa29.71■■■□□ 2.35
CPSF6-205ENST00000550075 STK36Q9NRP7 1315 aa29.71■■■□□ 2.35
CPSF6-205ENST00000550075 FIBPO43427 364 aa29.7■■■□□ 2.35
CPSF6-205ENST00000550075 ARHGAP1Q07960 439 aa29.7■■■□□ 2.35
CPSF6-205ENST00000550075 TRIM60Q495X7 471 aa29.7■■■□□ 2.35
CPSF6-205ENST00000550075 REXO1Q8N1G1 1221 aaKnown RBP29.7■■■□□ 2.35
CPSF6-205ENST00000550075 ANO3Q9BYT9 981 aa29.7■■■□□ 2.35
CPSF6-205ENST00000550075 PRKAG2Q9UGJ0 569 aa29.7■■■□□ 2.35
CPSF6-205ENST00000550075 A6NJR5 290 aa29.69■■■□□ 2.34
CPSF6-205ENST00000550075 ICAM3P32942 547 aa29.69■■■□□ 2.34
CPSF6-205ENST00000550075 LAMC2Q13753 1193 aa29.69■■■□□ 2.34
CPSF6-205ENST00000550075 DHX37Q8IY37 1157 aaKnown RBP29.69■■■□□ 2.34
CPSF6-205ENST00000550075 GTF3C6Q969F1 213 aa29.69■■■□□ 2.34
CPSF6-205ENST00000550075 EMID1Q96A84 441 aaPredicted RBP29.69■■■□□ 2.34
CPSF6-205ENST00000550075 CDHR1Q96JP9 859 aa29.69■■■□□ 2.34
CPSF6-205ENST00000550075 SEZ6LQ9BYH1 1024 aa29.69■■■□□ 2.34
CPSF6-205ENST00000550075 MYL3P08590 195 aa29.68■■■□□ 2.34
CPSF6-205ENST00000550075 GPRASP2Q96D09 838 aa29.68■■■□□ 2.34
CPSF6-205ENST00000550075 ZFP91Q96JP5 570 aaPredicted RBP29.68■■■□□ 2.34
CPSF6-205ENST00000550075 RTEL1Q9NZ71 1219 aa29.68■■■□□ 2.34
CPSF6-205ENST00000550075 VPS54Q9P1Q0 977 aa29.68■■■□□ 2.34
CPSF6-205ENST00000550075 GGPS1O95749 300 aa29.67■■■□□ 2.34
CPSF6-205ENST00000550075 UBA1P22314 1058 aaKnown RBP29.67■■■□□ 2.34
CPSF6-205ENST00000550075 CLK2P49760 499 aaKnown RBP29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms