RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 TSPYL2Q9H2G4 693 aaPredicted RBP18.01■□□□□ 0.47
RAB5C-205ENST00000550013 VAT1LQ9HCJ6 419 aa18.01■□□□□ 0.47
RAB5C-205ENST00000550013 DHX16O60231 1041 aaKnown RBP18■□□□□ 0.47
RAB5C-205ENST00000550013 EIF2AK2P19525 551 aaKnown RBP18■□□□□ 0.47
RAB5C-205ENST00000550013 COL9A1P20849 921 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 GPNMBQ14956 572 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 SKIV2LQ15477 1246 aaKnown RBP18■□□□□ 0.47
RAB5C-205ENST00000550013 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 CCDC178Q5BJE1 867 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 SPRED2Q7Z698 418 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 FBXO11Q86XK2 927 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 ARNTL2Q8WYA1 636 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 JMJD4Q9H9V9 463 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 DIAPH3Q9NSV4 1193 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 ZSWIM5Q9P217 1185 aa18■□□□□ 0.47
RAB5C-205ENST00000550013 COL4A4P53420 1690 aaPredicted RBP17.99■□□□□ 0.47
RAB5C-205ENST00000550013 GTPBP6O43824 516 aaPredicted RBP17.99■□□□□ 0.47
RAB5C-205ENST00000550013 BMP1P13497 986 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 POU3F3P20264 500 aaPredicted RBP17.99■□□□□ 0.47
RAB5C-205ENST00000550013 STXBP2Q15833 593 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 TMCO2Q7Z6W1 182 aaPredicted RBP17.99■□□□□ 0.47
RAB5C-205ENST00000550013 SESTD1Q86VW0 696 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 MCF2L2Q86YR7 1114 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 CCDC155Q8N6L0 562 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 CAGE1Q8TC20 777 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 MAF1Q9H063 256 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 RAPGEFL1Q9UHV5 662 aa17.99■□□□□ 0.47
RAB5C-205ENST00000550013 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
RAB5C-205ENST00000550013 BAIAP3O94812 1187 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 IGHDP01880 384 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 PARP1P09874 1014 aaKnown RBP17.98■□□□□ 0.47
RAB5C-205ENST00000550013 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
RAB5C-205ENST00000550013 KCNQ1P51787 676 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 TCTN1Q2MV58 587 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 ARHGEF16Q5VV41 709 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
RAB5C-205ENST00000550013 OSBPL3Q9H4L5 887 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 PXMP2Q9NR77 195 aa17.98■□□□□ 0.47
RAB5C-205ENST00000550013 DDX41Q9UJV9 622 aaKnown RBP17.98■□□□□ 0.47
RAB5C-205ENST00000550013 KIF28PB7ZC32 967 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 OPLAHO14841 1288 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 TLL1O43897 1013 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 CFBP00751 764 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 NR3C2P08235 984 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 ZNF286BP0CG31 522 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 SELPP16109 830 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 KCNJ6P48051 423 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 PSEN2P49810 448 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 NT5C2P49902 561 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 WDR5P61964 334 aaKnown RBP17.97■□□□□ 0.47
RAB5C-205ENST00000550013 NUCB1Q02818 461 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 DGKDQ16760 1214 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 LRRC8DQ7L1W4 858 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 STAG2Q8N3U4 1231 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 DSCC1Q9BVC3 393 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 HDAC6Q9UBN7 1215 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 GTF2IRD1Q9UHL9 959 aa17.97■□□□□ 0.47
RAB5C-205ENST00000550013 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
RAB5C-205ENST00000550013 LCHNA4D1U4 455 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 SORBS3O60504 671 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 NBNO60934 754 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 EIF3JO75822 258 aaKnown RBP17.96■□□□□ 0.47
RAB5C-205ENST00000550013 CKBP12277 381 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 DEFB103AP81534 67 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 GRB10Q13322 594 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 IMMTQ16891 758 aaKnown RBP17.96■□□□□ 0.47
RAB5C-205ENST00000550013 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 BRWD1Q9NSI6 2320 aa17.96■□□□□ 0.47
RAB5C-205ENST00000550013 PPP1R11O60927 126 aaPredicted RBP17.95■□□□□ 0.46
RAB5C-205ENST00000550013 HSD17B4P51659 736 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 RBL2Q08999 1139 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 MFSD10Q14728 455 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 AAK1Q2M2I8 961 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 CNKSR3Q6P9H4 555 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 C7orf31Q8N865 590 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 WNT8BQ93098 351 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 EMID1Q96A84 441 aaPredicted RBP17.95■□□□□ 0.46
RAB5C-205ENST00000550013 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 KRT23Q9C075 422 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 IL25Q9H293 177 aa17.95■□□□□ 0.46
RAB5C-205ENST00000550013 HAS3O00219 553 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 HIP1O00291 1037 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 LPXNO60711 386 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 RGS20O76081 388 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 F2P00734 622 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 CXCL10P02778 98 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 MYCLP12524 364 aaPredicted RBP17.94■□□□□ 0.46
RAB5C-205ENST00000550013 ZNF200P98182 395 aaPredicted RBP17.94■□□□□ 0.46
RAB5C-205ENST00000550013 LAMC2Q13753 1193 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 KIAA0753Q2KHM9 967 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 TRIM71Q2Q1W2 868 aaKnown RBP17.94■□□□□ 0.46
RAB5C-205ENST00000550013 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
RAB5C-205ENST00000550013 DHX37Q8IY37 1157 aaKnown RBP17.94■□□□□ 0.46
RAB5C-205ENST00000550013 IL31RAQ8NI17 732 aa17.94■□□□□ 0.46
RAB5C-205ENST00000550013 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms