RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 DIS3Q9Y2L1 958 aaKnown RBP7.86□□□□□ -1.15
TMEM116-208ENST00000549537 ZNF536O15090 1300 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 TSPY2A6NKD2 308 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 SEPT4O43236 478 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 RANBP6O60518 1105 aaKnown RBP7.85□□□□□ -1.15
TMEM116-208ENST00000549537 MSCO60682 206 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 PLA2G6O60733 806 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 GSPT1P15170 499 aaKnown RBP7.85□□□□□ -1.15
TMEM116-208ENST00000549537 OAZ1P54368 228 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 IRX6P78412 446 aaPredicted RBP7.85□□□□□ -1.15
TMEM116-208ENST00000549537 PRAMEF19Q5SWL8 479 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 RCSD1Q6JBY9 416 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 TBC1D10CQ8IV04 446 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 TMEM151AQ8N4L1 468 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 FGD4Q96M96 766 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 ZFAND3Q9H8U3 227 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 PRM3Q9NNZ6 103 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 SLC5A4Q9NY91 659 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 NRBP1Q9UHY1 535 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 NR2E3Q9Y5X4 410 aa7.85□□□□□ -1.15
TMEM116-208ENST00000549537 NEDD4P46934 1319 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 LCTP09848 1927 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 TMEM232C9JQI7 657 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 DLL1O00548 723 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 ZBED4O75132 1171 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 ZNF865P0CJ78 1059 aaPredicted RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 PCP11498 1178 aaKnown RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 TAL1P17542 331 aaPredicted RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 MCCP23508 829 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 BRD2P25440 801 aaKnown RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 HAND2P61296 217 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 KCTD2Q14681 263 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 LRRC26Q2I0M4 334 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 AKNAD1Q5T1N1 836 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 CWC27Q6UX04 472 aaKnown RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 MAMDC4Q6UXC1 1216 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 KCTD1Q719H9 257 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 FAM160B2Q86V87 743 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 MEIOBQ8N635 442 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 STAG1Q8WVM7 1258 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 FOXJ1Q92949 421 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 TINF2Q9BSI4 451 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 RAVER2Q9HCJ3 691 aaKnown RBP7.84□□□□□ -1.15
TMEM116-208ENST00000549537 STX8Q9UNK0 236 aa7.84□□□□□ -1.15
TMEM116-208ENST00000549537 LRRC37A2A6NM11 1700 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 SYNGAP1Q96PV0 1343 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 SMCHD1A6NHR9 2005 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 CFAP99D6REC4 459 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 HIP1O00291 1037 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 DNM1LO00429 736 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 SNAI1O95863 264 aaPredicted RBP7.83□□□□□ -1.16
TMEM116-208ENST00000549537 F12P00748 615 aaPredicted RBP7.83□□□□□ -1.16
TMEM116-208ENST00000549537 SNHG28P0DPA3 235 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 TOP1P11387 765 aaKnown RBP7.83□□□□□ -1.16
TMEM116-208ENST00000549537 CNGA1P29973 690 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 GRM5P41594 1212 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 SLC1A4P43007 532 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 STAT2P52630 851 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.83□□□□□ -1.16
TMEM116-208ENST00000549537 TTC22Q5TAA0 569 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 BTNL9Q6UXG8 535 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 MSL3Q8N5Y2 521 aaKnown RBP7.83□□□□□ -1.16
TMEM116-208ENST00000549537 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 CHURC1Q8WUH1 139 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 DCAF4Q8WV16 495 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 AGBL1Q96MI9 1066 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 GDF15Q99988 308 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 TMEM47Q9BQJ4 181 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 DIAPH3Q9NSV4 1193 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 PRR12Q9ULL5 1215 aa7.83□□□□□ -1.16
TMEM116-208ENST00000549537 ASTN1O14525 1302 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 PDHBP11177 359 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 SNAP25P60880 206 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 SNX17Q15036 470 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 LRRC41Q15345 812 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 RRP12Q5JTH9 1297 aaKnown RBP7.82□□□□□ -1.16
TMEM116-208ENST00000549537 GJC2Q5T442 439 aaPredicted RBP7.82□□□□□ -1.16
TMEM116-208ENST00000549537 ANO1Q5XXA6 986 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 MFSD6Q6ZSS7 791 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 FAM133AQ8N9E0 248 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 CHMP4CQ96CF2 233 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 TTC14Q96N46 770 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 KATNBL1Q9H079 304 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 RANBP17Q9H2T7 1088 aaKnown RBP7.82□□□□□ -1.16
TMEM116-208ENST00000549537 A1CFQ9NQ94 594 aaKnown RBP7.82□□□□□ -1.16
TMEM116-208ENST00000549537 FBXO40Q9UH90 709 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 ZMYND8Q9ULU4 1186 aaPredicted RBP7.82□□□□□ -1.16
TMEM116-208ENST00000549537 MAP4K5Q9Y4K4 846 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 MCM3APO60318 1980 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 LTBP2Q14767 1821 aa7.82□□□□□ -1.16
TMEM116-208ENST00000549537 RAD50Q92878 1312 aa7.81□□□□□ -1.16
TMEM116-208ENST00000549537 A0A1W2PPC1 479 aa7.81□□□□□ -1.16
TMEM116-208ENST00000549537 ZNF213O14771 459 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms