RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-215ENST00000549523 MMP3P08254 477 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 NOVP48745 357 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 TFAP4Q01664 338 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 DLX2Q07687 328 aaPredicted RBP13.79□□□□□ -0.2
USP15-215ENST00000549523 IKQ13123 557 aaPredicted RBP13.79□□□□□ -0.2
USP15-215ENST00000549523 SMAD2Q15796 467 aaKnown RBP13.79□□□□□ -0.2
USP15-215ENST00000549523 CTC1Q2NKJ3 1217 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 BRDTQ58F21 947 aaPredicted RBP13.79□□□□□ -0.2
USP15-215ENST00000549523 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 GTF2IRD1Q9UHL9 959 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
USP15-215ENST00000549523 INSL6Q9Y581 213 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 RAD50Q92878 1312 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 MYO7AQ13402 2215 aa13.79□□□□□ -0.2
USP15-215ENST00000549523 GPAA1O43292 621 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 NMT2O60551 498 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 EFCAB14O75071 495 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 LGR5O75473 907 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 TXNP10599 105 aaKnown RBP13.78□□□□□ -0.2
USP15-215ENST00000549523 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 IKBKEQ14164 716 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 HIC1Q14526 733 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 TTBK2Q6IQ55 1244 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 APPBP2Q92624 585 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
USP15-215ENST00000549523 CTNNA3Q9UI47 895 aa13.78□□□□□ -0.2
USP15-215ENST00000549523 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP15-215ENST00000549523 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 M0R296 226 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 CALML3P27482 149 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 SLC16A2P36021 539 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 TDO2P48775 406 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 CHMP4BP1P59074 171 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
USP15-215ENST00000549523 PTPROQ16827 1216 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 BTNL9Q6UXG8 535 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 EP400NLQ6ZTU2 488 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 RPAINQ86UA6 219 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 IFNL3Q8IZI9 196 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 BCL11AQ9H165 835 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 IRF2BPLQ9H1B7 796 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.21
USP15-215ENST00000549523 ZNF287Q9HBT7 754 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 HDAC6Q9UBN7 1215 aa13.77□□□□□ -0.21
USP15-215ENST00000549523 PTPDC1A2A3K4 754 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 FOXP2O15409 715 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 MBTPS2O43462 519 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 RAB11FIP3O75154 756 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 PDE4DQ08499 809 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 GPM6BQ13491 265 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 FBXO11Q86XK2 927 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 FBXL6Q8N531 539 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 DBF4BQ8NFT6 615 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 ATOH1Q92858 354 aaPredicted RBP13.76□□□□□ -0.21
USP15-215ENST00000549523 OSBPL7Q9BZF2 842 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 CLDND1Q9NY35 253 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 STX8Q9UNK0 236 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 ZFHX4Q86UP3 3567 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 DMXL1Q9Y485 3027 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 ATG2AQ2TAZ0 1938 aa13.76□□□□□ -0.21
USP15-215ENST00000549523 KMT2BQ9UMN6 2715 aaPredicted RBP13.76□□□□□ -0.21
USP15-215ENST00000549523 HAS3O00219 553 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 TBX10O75333 385 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
USP15-215ENST00000549523 HYAL1Q12794 435 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 PTK7Q13308 1070 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 CLUL1Q15846 466 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 RNF207Q6ZRF8 634 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 TMEM192Q8IY95 271 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 CRBNQ96SW2 442 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
USP15-215ENST00000549523 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 TPRP12270 2363 aaKnown RBP13.74□□□□□ -0.21
USP15-215ENST00000549523 PATL2C9JE40 543 aaKnown RBP13.74□□□□□ -0.21
USP15-215ENST00000549523 PROB1E7EW31 1015 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 RNF113AO15541 343 aaKnown RBP13.74□□□□□ -0.21
USP15-215ENST00000549523 F2P00734 622 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 AMHP03971 560 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 GNAT2P19087 354 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 PPARAQ07869 468 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 LY6KQ17RY6 165 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 PLEKHG4Q58EX7 1191 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 SYDE2Q5VT97 1194 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 DNERQ8NFT8 737 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
USP15-215ENST00000549523 NCOR2Q9Y618 2525 aa13.73□□□□□ -0.21
USP15-215ENST00000549523 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
USP15-215ENST00000549523 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms