RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ATP2C1P98194 919 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 KANK3Q6NY19 840 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 NLRC4Q9NPP4 1024 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 CCNT1O60563 726 aaKnown RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 ERCC5P28715 1186 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 COPB1P53618 953 aaKnown RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 BRD3Q15059 726 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 MYO6Q9UM54 1294 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
LINC00661-204ENST00000549354 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
LINC00661-204ENST00000549354 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 ESYT2A0FGR8 921 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
LINC00661-204ENST00000549354 ACTN2P35609 894 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 NT5DC1Q5TFE4 455 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 MTMR14Q8NCE2 650 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 MTRQ99707 1265 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 UBXN6Q9BZV1 441 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 FAM107BQ9H098 131 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 TULP2O00295 520 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 BUB1O43683 1085 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 IL17AQ16552 155 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 C4orf32Q8N8J7 132 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 DEF6Q9H4E7 631 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 BCS1LQ9Y276 419 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 CENPFP49454 3210 aa12.35□□□□□ -0.43
LINC00661-204ENST00000549354 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 TAL1P17542 331 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 SNAP25P60880 206 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 PAK1Q13153 545 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 SLC30A10Q6XR72 485 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 RRP36Q96EU6 259 aaKnown RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 GPCPD1Q9NPB8 672 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 NYAP2Q9P242 653 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 EPN1Q9Y6I3 576 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 MAP2K7O14733 419 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 EIF3JO75822 258 aaKnown RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 ZNF543Q08ER8 600 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 MTMR8Q96EF0 704 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 TMEM260Q9NX78 707 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 LLGL1Q15334 1064 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 ARL6IP4Q66PJ3 421 aaKnown RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 LRRC47Q8N1G4 583 aaKnown RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 EXOC4Q96A65 974 aa12.34□□□□□ -0.43
LINC00661-204ENST00000549354 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 MAGEC2Q9UBF1 373 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-204ENST00000549354 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 MPHOSPH10O00566 681 aaKnown RBP12.33□□□□□ -0.44
LINC00661-204ENST00000549354 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 NAPAP54920 295 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 PDE4DQ08499 809 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 TDRD12Q587J7 1177 aaKnown RBP12.33□□□□□ -0.44
LINC00661-204ENST00000549354 FKBP1CQ5VVH2 108 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 CSGALNACT2Q8N6G5 542 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 COA7Q96BR5 231 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 PIM2Q9P1W9 311 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 ATP8B1O43520 1251 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 NCK2O43639 380 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
LINC00661-204ENST00000549354 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
LINC00661-204ENST00000549354 MMP14P50281 582 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 TCP11X2Q5H9J9 407 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 GPATCH4Q5T3I0 446 aaKnown RBP12.33□□□□□ -0.44
LINC00661-204ENST00000549354 CDKAL1Q5VV42 579 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 GOLGA6L1Q8N7Z2 621 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 ZBED3Q96IU2 234 aaPredicted RBP12.33□□□□□ -0.44
LINC00661-204ENST00000549354 MTFR1LQ9H019 292 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
LINC00661-204ENST00000549354 PSMD14O00487 310 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 RNF40O75150 1001 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 NDUFA10O95299 355 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 MYBL2P10244 700 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 SLC16A2P36021 539 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 RBM5P52756 815 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 CACNB3P54284 484 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 DTHD1Q6ZMT9 781 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms