RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 TLL1O43897 1013 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 ZEB2O60315 1214 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 CA3P07451 260 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 PFKMP08237 780 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 GRM4Q14833 912 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 IQSEC1Q6DN90 963 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 CATIPQ7Z7H3 387 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 STAG2Q8N3U4 1231 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 MAP3K14Q99558 947 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 RNF146Q9NTX7 359 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 MAD2L2Q9UI95 211 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 BAZ2BQ9UIF8 2168 aaKnown RBP18.27■□□□□ 0.51
CHMP1A-206ENST00000549139 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 ARHGEF15O94989 841 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 ALAS1P13196 640 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 SKIV2LQ15477 1246 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 KRT40Q6A162 431 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 MORC4Q8TE76 937 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 TRMT13Q9NUP7 481 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 CCPG1Q9ULG6 757 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 COG5Q9UP83 839 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 SCN10AQ9Y5Y9 1956 aa18.26■□□□□ 0.51
CHMP1A-206ENST00000549139 CCDC69A6NI79 296 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 KLRF2D3W0D1 207 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 GTPBP6O43824 516 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 DDAH1O94760 285 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 CPVLQ9H3G5 476 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 CERS4Q9HA82 394 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 C11orf16Q9NQ32 467 aa18.25■□□□□ 0.51
CHMP1A-206ENST00000549139 CYP2C9P11712 490 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 PSMA5P28066 241 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 TAP1Q03518 808 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 NFXL1Q6ZNB6 911 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 SGMS1Q86VZ5 419 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 LRRC2Q9BYS8 371 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 CYP39A1Q9NYL5 469 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 HCN4Q9Y3Q4 1203 aa18.24■□□□□ 0.51
CHMP1A-206ENST00000549139 SUPT20HL2P0C7V6 817 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 CALM1P0DP23 149 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 CALM2P0DP24 149 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 CALM3P0DP25 149 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 CDC37Q16543 378 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 DUSP28Q4G0W2 176 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 MUM1L1Q5H9M0 696 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 TMEM31Q5JXX7 168 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 DEFB128Q7Z7B8 93 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 PHOSPHO2Q8TCD6 241 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 MTMR8Q96EF0 704 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 JAKMIP1Q96N16 626 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 SLC9A7Q96T83 725 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 VTA1Q9NP79 307 aa18.23■□□□□ 0.51
CHMP1A-206ENST00000549139 DHX16O60231 1041 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 LPXNO60711 386 aa18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 GPR37L1O60883 481 aa18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 SMARCA1P28370 1054 aa18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 KIF5BP33176 963 aa18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 PURAQ00577 322 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 CTCFLQ8NI51 663 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 PURBQ96QR8 312 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 SLC12A7Q9Y666 1083 aa18.22■□□□□ 0.51
CHMP1A-206ENST00000549139 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 QRICH1Q2TAL8 776 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 SYNE3Q6ZMZ3 975 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 FBXL16Q8N461 479 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 HLA-CQ95604 372 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 MYL10Q9BUA6 226 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 MAF1Q9H063 256 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 POLR3EQ9NVU0 708 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 PTPRSQ13332 1948 aa18.21■□□□□ 0.51
CHMP1A-206ENST00000549139 TANC1Q9C0D5 1861 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 RBM47A0AV96 593 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 ACTN1P12814 892 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 RFC2P35250 354 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 GNAQP50148 359 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 GRB10Q13322 594 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 SPRED2Q7Z698 418 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 FBXO11Q86XK2 927 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 CLEC4DQ8WXI8 215 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 LZTS2Q9BRK4 669 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 ABCB11O95342 1321 aa18.2■□□□□ 0.5
CHMP1A-206ENST00000549139 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 ZBTB5O15062 677 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 CYTH3O43739 400 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 IQCF3P0C7M6 154 aa18.19■□□□□ 0.5
CHMP1A-206ENST00000549139 CPA1P15085 419 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms