RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 GTF2IRD2BQ6EKJ0 949 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 GTF2IRD2Q86UP8 949 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 CHST12Q9NRB3 414 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 TRHDEQ9UKU6 1024 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 COQ6Q9Y2Z9 468 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 PCDHA8Q9Y5H6 950 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 STXBP3O00186 592 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 PRC1O43663 620 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 PPM1BO75688 479 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 SNRPB2P08579 225 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 PPP2R1AP30153 589 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 CYP4F3Q08477 520 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 Q6ZNB5 142 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 SMYD4Q8IYR2 804 aaPredicted RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 FIBCD1Q8N539 461 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 KCNH5Q8NCM2 988 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 ZNF507Q8TCN5 953 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 DDX1Q92499 740 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 BTBD6Q96KE9 485 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 RTFDC1Q9BY42 306 aaPredicted RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 TMPRSS13Q9BYE2 586 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 SLC5A4Q9NY91 659 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 NXF1Q9UBU9 619 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 NSFL1CQ9UNZ2 370 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 MAPRE3Q9UPY8 281 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 CAMTA1Q9Y6Y1 1673 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 PEAK1Q9H792 1746 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 DNAJC25-GNG10A0A024R161 153 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 HOXC9P31274 260 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 SUMO1P63165 101 aaKnown RBP4.79□□□□□ -1.64
APAF1-208ENST00000549007 CDK5R2Q13319 367 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 CFAP100Q494V2 611 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 CNTD1Q8N815 330 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 MCMBPQ9BTE3 642 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 PRKRIP1Q9H875 184 aaPredicted RBP4.79□□□□□ -1.64
APAF1-208ENST00000549007 RRAGCQ9HB90 399 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 CRTAC1Q9NQ79 661 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 AASDHPPTQ9NRN7 309 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 MAGEC2Q9UBF1 373 aaPredicted RBP4.79□□□□□ -1.64
APAF1-208ENST00000549007 RGS17Q9UGC6 210 aaPredicted RBP4.79□□□□□ -1.64
APAF1-208ENST00000549007 GDF2Q9UK05 429 aaPredicted RBP4.79□□□□□ -1.64
APAF1-208ENST00000549007 USP21Q9UK80 565 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 H0Y8X5 98 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 HOOK2Q96ED9 719 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 MRGPRX3Q96LB0 322 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 KREMEN1Q96MU8 473 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 MPHOSPH6Q99547 160 aaKnown RBP4.79□□□□□ -1.64
APAF1-208ENST00000549007 NSD2O96028 1365 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 PARD3Q8TEW0 1356 aa4.79□□□□□ -1.64
APAF1-208ENST00000549007 ANP32CO43423 234 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 RFPL3O75679 317 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 FGFR1P11362 822 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 NEK2P51955 445 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 TRIM59Q8IWR1 403 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 PRDM14Q9GZV8 571 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 GBP3Q9H0R5 595 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 WHRNQ9P202 907 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 LTN1O94822 1766 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 GABRDO14764 452 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 SLITRK5O94991 958 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 SRGAP2CP0DJJ0 459 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 TCIRG1Q13488 830 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 GRIK4Q16099 956 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 SYCP2LQ5T4T6 812 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 LETMD1Q6P1Q0 360 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 SLC4A10Q6U841 1118 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 CMIPQ8IY22 773 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 GPR101Q96P66 508 aaPredicted RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.78□□□□□ -1.64
APAF1-208ENST00000549007 H2AFY2Q9P0M6 372 aaPredicted RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 EMC9Q9Y3B6 208 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 CPDO75976 1380 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 BCL9LQ86UU0 1499 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 ANKRD26Q9UPS8 1709 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 RGPD5Q99666 1765 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 TCRBV16S1A1N1A0A5B0 115 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 ALG1L2C9J202 215 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 CST3P01034 146 aaPredicted RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 GNALP38405 381 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 IARSP41252 1262 aaKnown RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 PREPP48147 710 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 GFRA1P56159 465 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 SOX4Q06945 474 aaPredicted RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 SCRN1Q12765 414 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 EIF4A2Q14240 407 aaKnown RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 CRTC3Q6UUV7 619 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 TOM1L2Q6ZVM7 507 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 C7orf61Q8IZ16 206 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 DNAJB8Q8NHS0 232 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 PI4K2BQ8TCG2 481 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 WHAMMQ8TF30 809 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 IP6K1Q92551 441 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 MRPL4Q9BYD3 311 aaKnown RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 TMEFF2Q9UIK5 374 aaPredicted RBP4.78□□□□□ -1.64
APAF1-208ENST00000549007 PLCH1Q4KWH8 1693 aa4.78□□□□□ -1.64
APAF1-208ENST00000549007 MT-CO1P00395 513 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 HMOX1P09601 288 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 RHBDL3P58872 404 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 UNC5CLQ8IV45 518 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms