RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
PFDN5-206ENST00000548984 LRRC2Q9BYS8 371 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 MRVI1Q9Y6F6 885 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 hCG_1984214I3L0E3 225 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 ZBTB43O43298 467 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 MMP3P08254 477 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 TGFB3P10600 412 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 PTGS1P23219 599 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 FGD1P98174 961 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 ARHGAP1Q07960 439 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 GNPTABQ3T906 1256 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 VSIG10LQ86VR7 867 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 TMEM199Q8N511 208 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 ZNF713Q8N859 430 aaPredicted RBP11.79□□□□□ -0.52
PFDN5-206ENST00000548984 SMARCC2Q8TAQ2 1214 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 COPS5Q92905 334 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 ALDH8A1Q9H2A2 487 aaPredicted RBP11.79□□□□□ -0.52
PFDN5-206ENST00000548984 DDX41Q9UJV9 622 aaKnown RBP11.79□□□□□ -0.52
PFDN5-206ENST00000548984 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
PFDN5-206ENST00000548984 CCDC196A0A1B0GTZ2 297 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 MYCLP12524 364 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-206ENST00000548984 RXRAP19793 462 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 ITGB8P26012 769 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 PSMA5P28066 241 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 PSMC6P62333 389 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 COL9A3Q14050 684 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-206ENST00000548984 DGKDQ16760 1214 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 RTN1Q16799 776 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 LY6KQ17RY6 165 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 PSRC1Q6PGN9 363 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-206ENST00000548984 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 PPTC7Q8NI37 304 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 LRCH3Q96II8 777 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 KATNAL1Q9BW62 490 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 NID2Q14112 1375 aa11.78□□□□□ -0.52
PFDN5-206ENST00000548984 KLF18A0A0U1RQI7 1052 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 GOLGA8AA7E2F4 631 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 B4GALT4O60513 344 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 RGS20O76081 388 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 CASTP20810 708 aaKnown RBP11.77□□□□□ -0.53
PFDN5-206ENST00000548984 SHHQ15465 462 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 PCNX4Q63HM2 1172 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 DHX37Q8IY37 1157 aaKnown RBP11.77□□□□□ -0.53
PFDN5-206ENST00000548984 FBXL16Q8N461 479 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 IL31RAQ8NI17 732 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 RNPC3Q96LT9 517 aaKnown RBP11.77□□□□□ -0.53
PFDN5-206ENST00000548984 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
PFDN5-206ENST00000548984 INPP4AQ96PE3 977 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-206ENST00000548984 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
PFDN5-206ENST00000548984 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 EHMT1Q9H9B1 1298 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
PFDN5-206ENST00000548984 MEIS2O14770 477 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 FIBPO43427 364 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 HOXD8P13378 290 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-206ENST00000548984 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
PFDN5-206ENST00000548984 ICAM3P32942 547 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
PFDN5-206ENST00000548984 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 C9orf50Q5SZB4 431 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 CELF3Q5SZQ8 465 aaKnown RBP11.76□□□□□ -0.53
PFDN5-206ENST00000548984 FAM109BQ6ICB4 259 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-206ENST00000548984 HEATR3Q7Z4Q2 680 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 RAB11FIP4Q86YS3 637 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 MTIF3Q9H2K0 278 aaKnown RBP11.76□□□□□ -0.53
PFDN5-206ENST00000548984 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
PFDN5-206ENST00000548984 TANC1Q9C0D5 1861 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 GGPS1O95749 300 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 F2P00734 622 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 PFKMP08237 780 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 RPS6KB1P23443 525 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.538e-7■□□□□ 8.2
PFDN5-206ENST00000548984 EPHB4P54760 987 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 NEDD9Q14511 834 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 USP17L6PQ6QN14 398 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
PFDN5-206ENST00000548984 CDHR1Q96JP9 859 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 SPATA33Q96N06 139 aa11.75□□□□□ -0.53
PFDN5-206ENST00000548984 AGXT2Q9BYV1 514 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms