RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CFAP221Q4G0U5 840 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 KLHDC7AQ5VTJ3 777 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 LRRC55Q6ZSA7 311 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 PROM2Q8N271 834 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 TBCKQ8TEA7 893 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 LARP4BQ92615 738 aaKnown RBP10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 SYN2Q92777 582 aaPredicted RBP10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 HPS3Q969F9 1004 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 RUFY1Q96T51 708 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 TLR10Q9BXR5 811 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
SMARCD1-205ENST00000548573 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 BAG3O95817 575 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 RASA1P20936 1047 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 CCT5P48643 541 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 GNGT1P63211 74 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 GSTO1P78417 241 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 SLC7A5Q01650 507 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 EHHADHQ08426 723 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 ICE2Q659A1 982 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 IFT20Q8IY31 132 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 TSEN2Q8NCE0 465 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 BCAS4Q8TDM0 211 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 SH3RF3Q8TEJ3 882 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 PNMA5Q96PV4 448 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 TSG101Q99816 390 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 GDF3Q9NR23 364 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 SALL4Q9UJQ4 1053 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 COL16A1Q07092 1604 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 ZNF831Q5JPB2 1677 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 hCG_1984214I3L0E3 225 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 LDHBP07195 334 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 GOLGA8HP0CJ92 632 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 CXCR5P32302 372 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 TXKP42681 527 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 MATR3P43243 847 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 GFPT1Q06210 699 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 PDIA5Q14554 519 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 TMEM266Q2M3C6 531 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 CACNA2D4Q7Z3S7 1137 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 REXO1Q8N1G1 1221 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 ZNF713Q8N859 430 aaPredicted RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 WDR66Q8TBY9 1149 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 MTMR8Q96EF0 704 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 CDK5RAP3Q96JB5 506 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 RAB34Q9BZG1 259 aa10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 LUC7LQ9NQ29 371 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 RBM12Q9NTZ6 932 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 THRAP3Q9Y2W1 955 aaKnown RBP10.93□□□□□ -0.66
SMARCD1-205ENST00000548573 ATXN2Q99700 1313 aaKnown RBP10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 A0A0G2JS52 829 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 GRID2IPA4D2P6 1211 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 ANKRD65E5RJM6 399 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 RASSF7Q02833 373 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 KCNMA1Q12791 1236 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 CALCRLQ16602 461 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 TTMPQ5BVD1 217 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 EMC10Q5UCC4 262 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 CERS3Q8IU89 383 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 MREGQ8N565 214 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 RAD54LQ92698 747 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 HINFPQ9BQA5 517 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 CEP72Q9P209 647 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 FAM169AQ9Y6X4 670 aa10.92□□□□□ -0.66
SMARCD1-205ENST00000548573 NCK2O43639 380 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SERPING1P05155 500 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SLC1A4P43007 532 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 PAK2Q13177 524 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SEPT2Q15019 361 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 DYMQ7RTS9 669 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 TXNRD3Q86VQ6 643 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 IQCKQ8N0W5 287 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SLC44A5Q8NCS7 719 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 C1orf131Q8NDD1 294 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 ARL8AQ96BM9 186 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 ZIM3Q96PE6 472 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 PSMB7Q99436 277 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 EHD2Q9NZN4 543 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 MTMR7Q9Y216 660 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SNED1Q8TER0 1413 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 ZEB2O60315 1214 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 LDHCP07864 332 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 FKBP3Q00688 224 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 NAB2Q15742 525 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 TMEM119Q4V9L6 283 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 ZCWPW2Q504Y3 356 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SFMBT2Q5VUG0 894 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms