RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 SPZ1Q9BXG8 430 aa11□□□□□ -0.65
USP15-208ENST00000548524 UBE2OQ9C0C9 1292 aaKnown RBP11□□□□□ -0.65
USP15-208ENST00000548524 PRO3102Q9H379 93 aa11□□□□□ -0.65
USP15-208ENST00000548524 COL20A1Q9P218 1284 aa11□□□□□ -0.65
USP15-208ENST00000548524 ELP1O95163 1332 aa11□□□□□ -0.65
USP15-208ENST00000548524 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 A0A1W2PPC1 479 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 DCDC2CA8MYV0 355 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 NKRFO15226 690 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP15-208ENST00000548524 CABYRO75952 493 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 PLEKHA8P1O95397 391 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 PTGS1P23219 599 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 SMARCA1P28370 1054 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 HOXA13P31271 388 aaPredicted RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 BMP8BP34820 402 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 HSD17B4P51659 736 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 NKX3-2P78367 333 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 TTLL4Q14679 1199 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 STXBP2Q15833 593 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 ADCK5Q3MIX3 580 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 BRDTQ58F21 947 aaPredicted RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 TMEM63BQ5T3F8 832 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 SEPT14Q6ZU15 432 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 SGMS1Q86VZ5 419 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 SRBD1Q8N5C6 995 aaKnown RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 SAMD3Q8N6K7 520 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 PDLIM7Q9NR12 457 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 PXMP2Q9NR77 195 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 MAP3K20Q9NYL2 800 aaKnown RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 NAP1L2Q9ULW6 460 aaPredicted RBP10.99□□□□□ -0.65
USP15-208ENST00000548524 PCDHGA4Q9Y5G9 962 aa10.99□□□□□ -0.65
USP15-208ENST00000548524 ARVCFO00192 962 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 OPLAHO14841 1288 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 CTAGE5O15320 804 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 NR3C2P08235 984 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 CLTBP09497 229 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 TXNP10599 105 aaKnown RBP10.98□□□□□ -0.65
USP15-208ENST00000548524 MYCLP12524 364 aaPredicted RBP10.98□□□□□ -0.65
USP15-208ENST00000548524 HSPA4P34932 840 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 CPT1AP50416 773 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 EXOSC10Q01780 885 aaKnown RBP10.98□□□□□ -0.65
USP15-208ENST00000548524 CXCL17Q6UXB2 119 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 FCHSD1Q86WN1 690 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 CMTR1Q8N1G2 835 aaKnown RBP10.98□□□□□ -0.65
USP15-208ENST00000548524 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 FANCBQ8NB91 859 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 CUL5Q93034 780 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 JAKMIP1Q96N16 626 aaKnown RBP10.98□□□□□ -0.65
USP15-208ENST00000548524 TMEM39AQ9NV64 488 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 MROH7Q68CQ1 1323 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 PLXNA1Q9UIW2 1896 aa10.98□□□□□ -0.65
USP15-208ENST00000548524 ZNFX1Q9P2E3 1918 aaKnown RBP10.97□□□□□ -0.65
USP15-208ENST00000548524 KLF18A0A0U1RQI7 1052 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 TRIM43BA6NCK2 446 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
USP15-208ENST00000548524 ZBTB43O43298 467 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
USP15-208ENST00000548524 MYL3P08590 195 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 RAG1P15918 1043 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 FXR1P51114 621 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP15-208ENST00000548524 GHRHRQ02643 423 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 RTN1Q16799 776 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 APOA5Q6Q788 366 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 BLOC1S2Q6QNY1 142 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 TMTC3Q6ZXV5 915 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 ANKRD33Q7Z3H0 272 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 TDHQ8IZJ6 230 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 COPS5Q92905 334 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 KCNB2Q92953 911 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 TRIM43Q96BQ3 446 aaPredicted RBP10.97□□□□□ -0.65
USP15-208ENST00000548524 TOX2Q96NM4 488 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 PDCD2LQ9BRP1 358 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 POLR3EQ9NVU0 708 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 RBM28Q9NW13 759 aaKnown RBP10.97□□□□□ -0.65
USP15-208ENST00000548524 SNX14Q9Y5W7 946 aa10.97□□□□□ -0.65
USP15-208ENST00000548524 hCG_1642624A0A1W2PR95 340 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 ARIH2O95376 493 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 CPA1P15085 419 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 PSMA5P28066 241 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 CCND2P30279 289 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 CDK7P50613 346 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 FAAP100Q0VG06 881 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 ITGA7Q13683 1181 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 LY6KQ17RY6 165 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 ARSIQ5FYB1 569 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 Q6ZUG5 572 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 SMARCC2Q8TAQ2 1214 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 BADQ92934 168 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 MRVI1Q9Y6F6 885 aa10.96□□□□□ -0.65
USP15-208ENST00000548524 FRMPD3Q5JV73 1810 aa10.95□□□□□ -0.66
USP15-208ENST00000548524 KIAA0355O15063 1070 aa10.95□□□□□ -0.66
USP15-208ENST00000548524 KPNA6O60684 536 aa10.95□□□□□ -0.66
USP15-208ENST00000548524 GH1P01241 217 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms