RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 GH1P01241 217 aa24.86■■□□□ 1.57
USP44-204ENST00000547951 MYCLP12524 364 aaPredicted RBP24.86■■□□□ 1.57
USP44-204ENST00000547951 SART3Q15020 963 aaKnown RBP24.86■■□□□ 1.57
USP44-204ENST00000547951 BRDTQ58F21 947 aaPredicted RBP24.86■■□□□ 1.57
USP44-204ENST00000547951 OTOP2Q7RTS6 562 aa24.86■■□□□ 1.57
USP44-204ENST00000547951 CATIPQ7Z7H3 387 aa24.86■■□□□ 1.57
USP44-204ENST00000547951 HERVK_113Q902F9 699 aa24.86■■□□□ 1.57
USP44-204ENST00000547951 PDCD2LQ9BRP1 358 aa24.86■■□□□ 1.57
USP44-204ENST00000547951 DDX41Q9UJV9 622 aaKnown RBP24.86■■□□□ 1.57
USP44-204ENST00000547951 PRC1O43663 620 aa24.85■■□□□ 1.57
USP44-204ENST00000547951 SORBS3O60504 671 aa24.85■■□□□ 1.57
USP44-204ENST00000547951 EIF3JO75822 258 aaKnown RBP24.85■■□□□ 1.57
USP44-204ENST00000547951 GRIN2CQ14957 1233 aa24.85■■□□□ 1.57
USP44-204ENST00000547951 KAT2BQ92831 832 aa24.85■■□□□ 1.57
USP44-204ENST00000547951 PBX4Q9BYU1 374 aa24.85■■□□□ 1.57
USP44-204ENST00000547951 PNMA6FA0A0J9YX94 578 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 KPNA6O60684 536 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 FGBP02675 491 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 NFRKBQ6P4R8 1299 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 FCHSD1Q86WN1 690 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 ZNF654Q8IZM8 581 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 GPKOWQ92917 476 aaPredicted RBP eCLIP24.84■■□□□ 1.57
USP44-204ENST00000547951 TIFAQ96CG3 184 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 MRVI1Q9Y6F6 885 aa24.84■■□□□ 1.57
USP44-204ENST00000547951 TANC1Q9C0D5 1861 aa24.83■■□□□ 1.57
USP44-204ENST00000547951 MYO9BQ13459 2157 aa24.83■■□□□ 1.57
USP44-204ENST00000547951 PGM5Q15124 567 aa24.83■■□□□ 1.57
USP44-204ENST00000547951 CREB3L3Q68CJ9 461 aa24.83■■□□□ 1.57
USP44-204ENST00000547951 RAB11FIP4Q86YS3 637 aa24.83■■□□□ 1.57
USP44-204ENST00000547951 CTAGE1Q96RT6 745 aa24.83■■□□□ 1.57
USP44-204ENST00000547951 TRIP12Q14669 1992 aaPredicted RBP24.83■■□□□ 1.57
USP44-204ENST00000547951 CHD7Q9P2D1 2997 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 TET1Q8NFU7 2136 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 GCOM1H8Y6P7 765 aaPredicted RBP24.82■■□□□ 1.56
USP44-204ENST00000547951 SH2B2O14492 632 aaPredicted RBP24.82■■□□□ 1.56
USP44-204ENST00000547951 SUPT20HL2P0C7V6 817 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 POLR2MP0CAP2 368 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 RXRAP19793 462 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 SP2Q02086 613 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 NECTIN1Q15223 517 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 VSIG10LQ86VR7 867 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 CMTR1Q8N1G2 835 aaKnown RBP24.82■■□□□ 1.56
USP44-204ENST00000547951 LRRC2Q9BYS8 371 aa24.82■■□□□ 1.56
USP44-204ENST00000547951 TMEM265A0A087WTH1 108 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 PLEKHA8P1O95397 391 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 ZNF286BP0CG31 522 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 GDF6Q6KF10 455 aaPredicted RBP24.81■■□□□ 1.56
USP44-204ENST00000547951 DEFB128Q7Z7B8 93 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 MAFAQ8NHW3 353 aaPredicted RBP24.81■■□□□ 1.56
USP44-204ENST00000547951 ZNF576Q9H609 170 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 BCAS3Q9H6U6 928 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 ANO2Q9NQ90 1003 aa24.81■■□□□ 1.56
USP44-204ENST00000547951 DLL1O00548 723 aa24.8■■□□□ 1.56
USP44-204ENST00000547951 CASC1Q6TDU7 716 aa24.8■■□□□ 1.56
USP44-204ENST00000547951 EMID1Q96A84 441 aaPredicted RBP24.8■■□□□ 1.56
USP44-204ENST00000547951 MAP3K20Q9NYL2 800 aaKnown RBP24.8■■□□□ 1.56
USP44-204ENST00000547951 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
USP44-204ENST00000547951 DOCK5Q9H7D0 1870 aa24.8■■□□□ 1.56
USP44-204ENST00000547951 DDAH1O94760 285 aa24.79■■□□□ 1.56
USP44-204ENST00000547951 FOSL2P15408 326 aa24.79■■□□□ 1.56
USP44-204ENST00000547951 MCM5P33992 734 aa24.79■■□□□ 1.56
USP44-204ENST00000547951 RABGGTBP53611 331 aa24.79■■□□□ 1.56
USP44-204ENST00000547951 BMP2KLQ5H9B9 411 aa24.79■■□□□ 1.56
USP44-204ENST00000547951 SRBD1Q8N5C6 995 aaKnown RBP24.79■■□□□ 1.56
USP44-204ENST00000547951 UBA1P22314 1058 aaKnown RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 PTPN11Q06124 597 aaPredicted RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 PTGISQ16647 500 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 DGKDQ16760 1214 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 MYSM1Q5VVJ2 828 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 NFXL1Q6ZNB6 911 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 CENPQQ7L2Z9 268 aaPredicted RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 DHX37Q8IY37 1157 aaKnown RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 RPUSD2Q8IZ73 545 aaKnown RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 PPTC7Q8NI37 304 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 CTCFLQ8NI51 663 aaPredicted RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 DHX38Q92620 1227 aaKnown RBP24.78■■□□□ 1.56
USP44-204ENST00000547951 MAP3K14Q99558 947 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 ALG1Q9BT22 464 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 SPZ1Q9BXG8 430 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 NKX2-4Q9H2Z4 354 aa24.78■■□□□ 1.56
USP44-204ENST00000547951 VCANP13611 3396 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 hCG_1642624A0A1W2PR95 340 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 GGPS1O95749 300 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 IQCF3P0C7M6 154 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 MYOGP15173 224 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 CASTP20810 708 aaKnown RBP24.77■■□□□ 1.56
USP44-204ENST00000547951 CCND2P30279 289 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 PSEN2P49810 448 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 MRPS9P82933 396 aaKnown RBP24.77■■□□□ 1.56
USP44-204ENST00000547951 LAMC2Q13753 1193 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 HSDL1Q3SXM5 330 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 CELF3Q5SZQ8 465 aaKnown RBP24.77■■□□□ 1.56
USP44-204ENST00000547951 USP17L6PQ6QN14 398 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.77■■□□□ 1.56
USP44-204ENST00000547951 SAMD3Q8N6K7 520 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 HDAC6Q9UBN7 1215 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 NOD1Q9Y239 953 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 FRMPD4Q14CM0 1322 aa24.77■■□□□ 1.56
USP44-204ENST00000547951 ZBBXA8MT70 800 aa24.76■■□□□ 1.55
USP44-204ENST00000547951 HIC1Q14526 733 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms