RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 CNKSR3Q6P9H4 555 aa15.91■□□□□ 0.14
CCDC59-202ENST00000547758 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.91■□□□□ 0.14
CCDC59-202ENST00000547758 DCAF4Q8WV16 495 aa15.91■□□□□ 0.14
CCDC59-202ENST00000547758 GPATCH3Q96I76 525 aa15.91■□□□□ 0.14
CCDC59-202ENST00000547758 CTAGE1Q96RT6 745 aa15.91■□□□□ 0.14
CCDC59-202ENST00000547758 MPHOSPH6Q99547 160 aaKnown RBP15.91■□□□□ 0.14
CCDC59-202ENST00000547758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC59-202ENST00000547758 LINC01553A4QN01 128 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 TXNP10599 105 aaKnown RBP15.9■□□□□ 0.14
CCDC59-202ENST00000547758 ALADP13716 330 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 IL9P15248 144 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 SELPP16109 830 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 EDNRBP24530 442 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 SLC16A2P36021 539 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 SYDE2Q5VT97 1194 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 TTBK2Q6IQ55 1244 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 LRRC8DQ7L1W4 858 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 UIMC1Q96RL1 719 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 RAD9AQ99638 391 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 ATG2AQ2TAZ0 1938 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 MYO7AQ13402 2215 aa15.9■□□□□ 0.14
CCDC59-202ENST00000547758 PARNO95453 639 aaKnown RBP15.89■□□□□ 0.13
CCDC59-202ENST00000547758 CXCL10P02778 98 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 MRE11P49959 708 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 RBL2Q08999 1139 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 CSPP1Q1MSJ5 1256 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 PTCRAQ6ISU1 281 aaPredicted RBP15.89■□□□□ 0.13
CCDC59-202ENST00000547758 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
CCDC59-202ENST00000547758 BTNL9Q6UXG8 535 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 SESTD1Q86VW0 696 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 CLEC4DQ8WXI8 215 aa15.89■□□□□ 0.13
CCDC59-202ENST00000547758 DHX38Q92620 1227 aaKnown RBP15.89■□□□□ 0.13
CCDC59-202ENST00000547758 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
CCDC59-202ENST00000547758 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
CCDC59-202ENST00000547758 ABHD14A-ACY1A0A1B0GW23 586 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 NBNO60934 754 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 ARIH2O95376 493 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 NOVP48745 357 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 RPS6P62753 249 aaKnown RBP15.88■□□□□ 0.13
CCDC59-202ENST00000547758 TCTN1Q2MV58 587 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 DNERQ8NFT8 737 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 CRBNQ96SW2 442 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 INCENPQ9NQS7 918 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 RALGAPA2Q2PPJ7 1873 aa15.88■□□□□ 0.13
CCDC59-202ENST00000547758 C5orf42Q9H799 3197 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
CCDC59-202ENST00000547758 EFCAB14O75071 495 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 MMP3P08254 477 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 CKBP12277 381 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 CTDSPL2Q05D32 466 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 FAM117BQ6P1L5 589 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 AFG1LQ8WV93 481 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 PNMA2Q9UL42 364 aa15.87■□□□□ 0.13
CCDC59-202ENST00000547758 FRMPD2Q68DX3 1309 aaPredicted RBP15.87■□□□□ 0.13
CCDC59-202ENST00000547758 TRIOO75962 3097 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 GRXCR2A6NFK2 248 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 B4DLN1 442 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
CCDC59-202ENST00000547758 NHLH1Q02575 133 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 IKBKEQ14164 716 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 PUS10Q3MIT2 529 aaKnown RBP15.86■□□□□ 0.13
CCDC59-202ENST00000547758 FBXO22Q8NEZ5 403 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 KAT2BQ92831 832 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 GPCPD1Q9NPB8 672 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 GTF2IRD1Q9UHL9 959 aa15.86■□□□□ 0.13
CCDC59-202ENST00000547758 DCXO43602 365 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 ZMYM1Q5SVZ6 1142 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 NEK9Q8TD19 979 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 C17orf80Q9BSJ5 609 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 KCNH6Q9H252 994 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 INSL6Q9Y581 213 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 WDR19Q8NEZ3 1342 aa15.85■□□□□ 0.13
CCDC59-202ENST00000547758 FOXP2O15409 715 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 ORC4O43929 436 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 GH1P01241 217 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 TOP1P11387 765 aaKnown RBP15.84■□□□□ 0.13
CCDC59-202ENST00000547758 CASTP20810 708 aaKnown RBP15.84■□□□□ 0.13
CCDC59-202ENST00000547758 ARHGAP1Q07960 439 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 MRPL38Q96DV4 380 aaKnown RBP15.84■□□□□ 0.13
CCDC59-202ENST00000547758 FBXL18Q96ME1 805 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 TMEM47Q9BQJ4 181 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 FSD1Q9BTV5 496 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 CTNNA3Q9UI47 895 aa15.84■□□□□ 0.13
CCDC59-202ENST00000547758 H3BQ06 376 aaPredicted RBP15.83■□□□□ 0.12
CCDC59-202ENST00000547758 PDHBP11177 359 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 GSE1Q14687 1217 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 PTPROQ16827 1216 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 LY6KQ17RY6 165 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 TIGD5Q53EQ6 642 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 TRAF7Q6Q0C0 670 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 CHST3Q7LGC8 479 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 C7orf31Q8N865 590 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 ANAPC4Q9UJX5 808 aa15.83■□□□□ 0.12
CCDC59-202ENST00000547758 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
CCDC59-202ENST00000547758 RBAK-RBAKDNI3L0D1 243 aa15.82■□□□□ 0.12
CCDC59-202ENST00000547758 LGR5O75473 907 aa15.82■□□□□ 0.12
CCDC59-202ENST00000547758 PSEN2P49810 448 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms