RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 RNF10Q8N5U6 811 aaKnown RBP16.23■□□□□ 0.19
LETMD1-209ENST00000547318 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
LETMD1-209ENST00000547318 SH2D4AQ9H788 454 aa16.23■□□□□ 0.19
LETMD1-209ENST00000547318 GREB1LQ9C091 1923 aaPredicted RBP16.22■□□□□ 0.19
LETMD1-209ENST00000547318 IVLP07476 585 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 ZNF543Q08ER8 600 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 MMGT1Q8N4V1 131 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 IFIH1Q9BYX4 1025 aaKnown RBP16.22■□□□□ 0.19
LETMD1-209ENST00000547318 COA1Q9GZY4 146 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 TRIM10Q9UDY6 481 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 SNX12Q9UMY4 172 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 MTMR7Q9Y216 660 aa16.22■□□□□ 0.19
LETMD1-209ENST00000547318 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 ERICH4A6NGS2 130 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 MARSP56192 900 aaKnown RBP16.21■□□□□ 0.19
LETMD1-209ENST00000547318 FKBP3Q00688 224 aaKnown RBP16.21■□□□□ 0.19
LETMD1-209ENST00000547318 MOXD1Q6UVY6 613 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 TEX2Q8IWB9 1127 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 MTMR8Q96EF0 704 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 DEF6Q9H4E7 631 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 PCDHA13Q9Y5I0 950 aa16.21■□□□□ 0.19
LETMD1-209ENST00000547318 KLRG2A4D1S0 409 aaPredicted RBP16.21■□□□□ 0.18
LETMD1-209ENST00000547318 KIF11P52732 1056 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 LEKR1Q6ZMV7 388 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 LRRC55Q6ZSA7 311 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 NEK11Q8NG66 645 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 CCDC17Q96LX7 622 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 ATAD5Q96QE3 1844 aa16.21■□□□□ 0.18
LETMD1-209ENST00000547318 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 CCDC96Q2M329 555 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 CCDC65Q8IXS2 484 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 KCTD17Q8N5Z5 321 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 DDX12PQ92771 950 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 MMS19Q96T76 1030 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 LACRTQ9GZZ8 138 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 EHD4Q9H223 541 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 CEP72Q9P209 647 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 HYOU1Q9Y4L1 999 aa16.2■□□□□ 0.18
LETMD1-209ENST00000547318 ACTN2P35609 894 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 USP11P51784 963 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 ZCWPW2Q504Y3 356 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 SP8Q8IXZ3 490 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 COG1Q8WTW3 980 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 TMEM260Q9NX78 707 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 VPS18Q9P253 973 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
LETMD1-209ENST00000547318 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 COL4A3BPQ9Y5P4 624 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 ENC1O14682 589 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 SLC37A4O43826 429 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 AKR1B10O60218 316 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 HNRNPH2P55795 449 aaKnown RBP16.19■□□□□ 0.18
LETMD1-209ENST00000547318 GLE1Q53GS7 698 aaKnown RBP16.19■□□□□ 0.18
LETMD1-209ENST00000547318 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 C2CD5Q86YS7 1000 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 UBA5Q9GZZ9 404 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 ZCCHC17Q9NP64 241 aaKnown RBP16.19■□□□□ 0.18
LETMD1-209ENST00000547318 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 ARHGAP20Q9P2F6 1191 aa16.19■□□□□ 0.18
LETMD1-209ENST00000547318 ZBTB5O15062 677 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 TDP2O95551 362 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 SERPINB2P05120 415 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 TNFRSF8P28908 595 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 ZSCAN26Q16670 478 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 ZC3H3Q8IXZ2 948 aaKnown RBP16.18■□□□□ 0.18
LETMD1-209ENST00000547318 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 MMRN2Q9H8L6 949 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 JMJD4Q9H9V9 463 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 RCCD1A6NED2 376 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 KLK7P49862 253 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 COASYQ13057 564 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 AP3B2Q13367 1082 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 SLC9C1Q4G0N8 1177 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 FAM26FQ5R3K3 315 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 PTF1AQ7RTS3 328 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 CACNA2D4Q7Z3S7 1137 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 AMIGO3Q86WK7 504 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 SLFN12Q8IYM2 578 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 BAP1Q92560 729 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 HDAC6Q9UBN7 1215 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 PCDHA12Q9UN75 941 aa16.18■□□□□ 0.18
LETMD1-209ENST00000547318 FRMPD2Q68DX3 1309 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms