RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 TRPV6Q9H1D0 765 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 MTIF3Q9H2K0 278 aaKnown RBP12.36□□□□□ -0.43
LINC00661-202ENST00000547102 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 GRIN2DO15399 1336 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 CSF2RAP15509 400 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 RXRAP19793 462 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 CASTP20810 708 aaKnown RBP12.35□□□□□ -0.43
LINC00661-202ENST00000547102 SMAD3P84022 425 aaKnown RBP12.35□□□□□ -0.43
LINC00661-202ENST00000547102 FGD1P98174 961 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 PGM5Q15124 567 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 DGKDQ16760 1214 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 FAM109BQ6ICB4 259 aaPredicted RBP12.35□□□□□ -0.43
LINC00661-202ENST00000547102 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
LINC00661-202ENST00000547102 TRMT13Q9NUP7 481 aaKnown RBP12.35□□□□□ -0.43
LINC00661-202ENST00000547102 DDX41Q9UJV9 622 aaKnown RBP12.35□□□□□ -0.43
LINC00661-202ENST00000547102 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
LINC00661-202ENST00000547102 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
LINC00661-202ENST00000547102 PTPN11Q06124 597 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-202ENST00000547102 LAMC2Q13753 1193 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
LINC00661-202ENST00000547102 VSIG10LQ86VR7 867 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
LINC00661-202ENST00000547102 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
LINC00661-202ENST00000547102 KATNAL1Q9BW62 490 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 IL23AQ9NPF7 189 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 RBM28Q9NW13 759 aaKnown RBP12.34□□□□□ -0.43
LINC00661-202ENST00000547102 MTMR10Q9NXD2 777 aa12.34□□□□□ -0.43
LINC00661-202ENST00000547102 STAM2O75886 525 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 REC8O95072 547 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 RPUSD2Q8IZ73 545 aaKnown RBP12.33□□□□□ -0.44
LINC00661-202ENST00000547102 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
LINC00661-202ENST00000547102 SRBD1Q8N5C6 995 aaKnown RBP12.33□□□□□ -0.44
LINC00661-202ENST00000547102 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 IL31RAQ8NI17 732 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC00661-202ENST00000547102 FRMPD4Q14CM0 1322 aa12.33□□□□□ -0.44
LINC00661-202ENST00000547102 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-202ENST00000547102 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-202ENST00000547102 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 ZBTB43O43298 467 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 GGPS1O95749 300 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 ACRP10323 421 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 TGFB3P10600 412 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 CYP2C9P11712 490 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 CCL23P55773 120 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 BFSP2Q13515 415 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 RTN1Q16799 776 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 TMEM240Q5SV17 173 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 ZNF365Q70YC5 407 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 CCDC82Q8N4S0 544 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 TCEANC2Q96MN5 208 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 SPATA33Q96N06 139 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 PSTPIP2Q9H939 334 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 MLXIPQ9HAP2 919 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-202ENST00000547102 STXBP5LQ9Y2K9 1186 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 MYH7BA7E2Y1 1941 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
LINC00661-202ENST00000547102 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 SORBS3O60504 671 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 RGS20O76081 388 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 FGBP02675 491 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 PFKMP08237 780 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 UBA1P22314 1058 aaKnown RBP12.31□□□□□ -0.44
LINC00661-202ENST00000547102 COL9A3Q14050 684 aaPredicted RBP12.31□□□□□ -0.44
LINC00661-202ENST00000547102 PTGISQ16647 500 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 ADCK5Q3MIX3 580 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 CELF3Q5SZQ8 465 aaKnown RBP12.31□□□□□ -0.44
LINC00661-202ENST00000547102 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 C7orf31Q8N865 590 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 WNT8AQ9H1J5 351 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 EHMT1Q9H9B1 1298 aa12.31□□□□□ -0.44
LINC00661-202ENST00000547102 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 hCG_1642624A0A1W2PR95 340 aa12.3□□□□□ -0.44
LINC00661-202ENST00000547102 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms