RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 CDC37Q16543 378 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 FAM153CQ494X1 144 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 ZSCAN10Q96SZ4 725 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 FAM153AQ9UHL3 310 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 PRDM1O75626 825 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 MYH3P11055 1940 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 CYP19A1P11511 503 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 SEC24CP53992 1094 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 FOXR2Q6PJQ5 311 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-216ENST00000546483 FAM228AQ86W67 206 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 LCORLQ8N3X6 602 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 CEP120Q8N960 986 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 OSBPL7Q9BZF2 842 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 TMEM59LQ9UK28 342 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 SLC4A4Q9Y6R1 1079 aa13.48□□□□□ -0.25
ATXN2-216ENST00000546483 MROH5Q6ZUA9 1318 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 H0YGN5 161 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 PRKAB2O43741 272 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 MGRN1O60291 552 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 DNAJC8O75937 253 aaPredicted RBP13.47□□□□□ -0.25
ATXN2-216ENST00000546483 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 PLEKP08567 350 aaPredicted RBP13.47□□□□□ -0.25
ATXN2-216ENST00000546483 CTSWP56202 376 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 ITPK1Q13572 414 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 N4BP2L2Q92802 583 aaPredicted RBP13.47□□□□□ -0.25
ATXN2-216ENST00000546483 FAM89AQ96GI7 184 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 FAXDC2Q96IV6 333 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 NOC4LQ9BVI4 516 aaKnown RBP13.47□□□□□ -0.25
ATXN2-216ENST00000546483 CNNM1Q9NRU3 951 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 DDX20Q9UHI6 824 aaKnown RBP13.47□□□□□ -0.25
ATXN2-216ENST00000546483 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
ATXN2-216ENST00000546483 NFS1Q9Y697 457 aa13.47□□□□□ -0.25
ATXN2-216ENST00000546483 E7EVH7 732 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 LAD1O00515 517 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 PES1O00541 588 aaKnown RBP13.46□□□□□ -0.25
ATXN2-216ENST00000546483 PPP1R12AO14974 1030 aaPredicted RBP13.46□□□□□ -0.25
ATXN2-216ENST00000546483 RTN2O75298 545 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 EIF4A3P38919 411 aaKnown RBP13.46□□□□□ -0.25
ATXN2-216ENST00000546483 MATR3P43243 847 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATXN2-216ENST00000546483 MAGEA1P43355 309 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 AGBL2Q5U5Z8 902 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 CASKIN2Q8WXE0 1202 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 SYN2Q92777 582 aaPredicted RBP13.46□□□□□ -0.25
ATXN2-216ENST00000546483 CCDC114Q96M63 670 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
ATXN2-216ENST00000546483 ISCUQ9H1K1 167 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 GREM2Q9H772 168 aa13.46□□□□□ -0.25
ATXN2-216ENST00000546483 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.26
ATXN2-216ENST00000546483 SCG2P13521 617 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 EZRP15311 586 aaKnown RBP13.46□□□□□ -0.26
ATXN2-216ENST00000546483 CALML3P27482 149 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 MCM7P33993 719 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 PRPHP41219 470 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 SLC8A3P57103 927 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 GUCY2DQ02846 1103 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 CUL1Q13616 776 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 RASGRF1Q13972 1273 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.26
ATXN2-216ENST00000546483 ANKRD40Q6AI12 368 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 RUFY4Q6ZNE9 571 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 MAB21L3Q8N8X9 362 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 BAP1Q92560 729 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 MTMR8Q96EF0 704 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 C7orf25Q9BPX7 421 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 HINFPQ9BQA5 517 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 KDM4CQ9H3R0 1056 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.26
ATXN2-216ENST00000546483 SH3GLB2Q9NR46 395 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 SALL4Q9UJQ4 1053 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.26
ATXN2-216ENST00000546483 GOLGA6L10A6NI86 522 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 DNM1LO00429 736 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 KIF3CO14782 793 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 AKR1B10O60218 316 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 CXCR5P32302 372 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
ATXN2-216ENST00000546483 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 CENPPQ6IPU0 288 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 FMNL3Q8IVF7 1028 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
ATXN2-216ENST00000546483 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
ATXN2-216ENST00000546483 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
ATXN2-216ENST00000546483 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
ATXN2-216ENST00000546483 A0A1B0GUA9 196 aa13.44□□□□□ -0.26
ATXN2-216ENST00000546483 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
ATXN2-216ENST00000546483 APBA3O96018 575 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms