RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ZNF792Q3KQV3 632 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 MAMDC4Q6UXC1 1216 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 SLFN12Q8IYM2 578 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 GPRASP2Q96D09 838 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 ERO1AQ96HE7 468 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 SPATA32Q96LK8 384 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 DDX25Q9UHL0 483 aaKnown RBP18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 MCM3APO60318 1980 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 SYNGAP1Q96PV0 1343 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 FAM205CA6NFA0 338 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 DDX11L8A8MPP1 907 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 TRPA1O75762 1119 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 HOXD10P28358 340 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 ZNF76P36508 570 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 HTRA3P83110 453 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 PTPAQ15257 358 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 STXBP2Q15833 593 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 KCNV1Q6PIU1 500 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 NLRX1Q86UT6 975 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 USP6NLQ92738 828 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 FAM20AQ96MK3 541 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 INPP4AQ96PE3 977 aaPredicted RBP18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 PCDHB6Q9Y5E3 794 aa18.17■□□□□ 0.5
PRPF40A-212ENST00000545856 GPR25O00155 361 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 MEIS1O00470 390 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 SPTLC2O15270 562 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 PEX10O60683 326 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 NCLP19338 710 aaKnown RBP18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 DPP9Q86TI2 863 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 LEO1Q8WVC0 666 aaPredicted RBP18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 APBA2Q99767 749 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 MXRA8Q9BRK3 442 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 RAB34Q9BZG1 259 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 UBIAD1Q9Y5Z9 338 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 STK24Q9Y6E0 443 aa18.16■□□□□ 0.5
PRPF40A-212ENST00000545856 SOWAHBA6NEL2 793 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 OR52Z1P0C646 297 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 TGFB3P10600 412 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 EIF2AK2P19525 551 aaKnown RBP18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 PDE4DQ08499 809 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 OLFML2BQ68BL8 750 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 ZNF579Q8NAF0 562 aaKnown RBP18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 PGBD1Q96JS3 809 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 KCNMB3Q9NPA1 279 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 WBP1LQ9NX94 342 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 NRBP1Q9UHY1 535 aa18.15■□□□□ 0.5
PRPF40A-212ENST00000545856 IGLV3-22A0A075B6J6 115 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 SLC26A4O43511 780 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 FKTNO75072 461 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 ICAM3P32942 547 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 MCM7P33993 719 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 PSMC4P43686 418 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 PTGDRQ13258 359 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 CALCRLQ16602 461 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 DNAJC5GQ8N7S2 189 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 AK8Q96MA6 479 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 VTA1Q9NP79 307 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 CNPY2Q9Y2B0 182 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 SRPRBQ9Y5M8 271 aaKnown RBP18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 CLIC4Q9Y696 253 aa18.14■□□□□ 0.49
PRPF40A-212ENST00000545856 FAM86B1E9PN63 330 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 FIBPO43427 364 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 EDIL3O43854 480 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 TDP2O95551 362 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 TBC1D8O95759 1140 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 FAM86B2P0C5J1 330 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 CNTN2Q02246 1040 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 TMEM266Q2M3C6 531 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 C4orf32Q8N8J7 132 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 LENG9Q96B70 501 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 MAML3Q96JK9 1138 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 FGD4Q96M96 766 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 RIT2Q99578 217 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 SENP7Q9BQF6 1050 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 GJD2Q9UKL4 321 aa18.13■□□□□ 0.49
PRPF40A-212ENST00000545856 LOXHD1Q8IVV2 1947 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 ASTN1O14525 1302 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 A0A1W2PQ27 194 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 A0A1W2PQ64 194 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 A0A1W2PQD8 194 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 CUTAO60888 179 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 PGK2P07205 417 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 ATP2B1P20020 1258 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 LONP1P36776 959 aaKnown RBP18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.495e-9■■■□□ 17
PRPF40A-212ENST00000545856 MTMR1Q13613 665 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 PDIA5Q14554 519 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 ZNF174Q15697 407 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 DTHD1Q6ZMT9 781 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 PLA2G4DQ86XP0 818 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 ETNPPLQ8TBG4 499 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 TRIM47Q96LD4 638 aa18.12■□□□□ 0.49
PRPF40A-212ENST00000545856 TINF2Q9BSI4 451 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms