RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 DENND5AQ6IQ26 1287 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 RELTQ969Z4 430 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 CCDC140Q96MF4 163 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 AP5M1Q9H0R1 490 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 EPN3Q9H201 632 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 PRRG2O14669 202 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 LCP1P13796 627 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 GRIA2P42262 883 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 LIPIQ6XZB0 460 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 CEP68Q76N32 757 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 Q8N1Y9 231 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 RCBTB1Q8NDN9 531 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 DDX11Q96FC9 970 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
SNHG1-224ENST00000545688 KLF4O43474 513 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 MYO1BO43795 1136 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 C8BP07358 591 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 LTBRP36941 435 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 SLC6A11P48066 632 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 KCNC1P48547 511 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 PPP2R2AP63151 447 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 TESK1Q15569 626 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 DDR2Q16832 855 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 RIOX2Q8IUF8 465 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 SEC14L1Q92503 715 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 TRMT2BQ96GJ1 504 aaKnown RBP7.63□□□□□ -1.19
SNHG1-224ENST00000545688 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 PALD1Q9ULE6 856 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 X6R8D5 127 aa7.63□□□□□ -1.19
SNHG1-224ENST00000545688 A0A1W2PQU0 124 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 SH3D21A4FU49 640 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 AGRPO00253 132 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 FOXD2O60548 495 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-224ENST00000545688 GTF2A2P52657 109 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 SLC35F1Q5T1Q4 408 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 MROH9Q5TGP6 573 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 TMEM169Q96HH4 297 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 SYT3Q9BQG1 590 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 ADAM7Q9H2U9 754 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 PCDHA2Q9Y5H9 948 aa7.62□□□□□ -1.19
SNHG1-224ENST00000545688 CYP2C8P10632 490 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 SMAD4Q13485 552 aaKnown RBP7.61□□□□□ -1.19
SNHG1-224ENST00000545688 ETV3LQ6ZN32 361 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 MILR1Q7Z6M3 343 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 MIB1Q86YT6 1006 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 FAM26EQ8N5C1 309 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 ZBTB8AQ96BR9 441 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
SNHG1-224ENST00000545688 SPATA6Q9NWH7 488 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-224ENST00000545688 BUD31P41223 144 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-224ENST00000545688 CARFQ8N187 725 aa7.6□□□□□ -1.19
SNHG1-224ENST00000545688 CHAMP1Q96JM3 812 aa7.6□□□□□ -1.19
SNHG1-224ENST00000545688 IER2Q9BTL4 223 aa7.6□□□□□ -1.19
SNHG1-224ENST00000545688 COA3Q9Y2R0 106 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-224ENST00000545688 E9PSI1 815 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 MAP4K2Q12851 820 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 LSAMPQ13449 338 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 LINC00482Q8N8I6 264 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 CXorf38Q8TB03 319 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 KCTD13Q8WZ19 329 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 CLDND1Q9NY35 253 aa7.59□□□□□ -1.19
SNHG1-224ENST00000545688 H7BY64 318 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 DLX3O60479 287 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 SYN1P17600 705 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 NT5DC1Q5TFE4 455 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 FRMD5Q7Z6J6 570 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 FAM126BQ8IXS8 530 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 TEPSINQ96N21 525 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 NPFFR2Q9Y5X5 522 aa7.58□□□□□ -1.2
SNHG1-224ENST00000545688 STAT5AP42229 794 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 RAB33AQ14088 237 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-224ENST00000545688 STK32CQ86UX6 486 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 SGSM3Q96HU1 749 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-224ENST00000545688 PODXL2Q9NZ53 605 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 NTMQ9P121 344 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 ZNF652Q9Y2D9 606 aa7.57□□□□□ -1.2
SNHG1-224ENST00000545688 SARSP49591 514 aaKnown RBP7.56□□□□□ -1.2
SNHG1-224ENST00000545688 TTLL7Q6ZT98 887 aa7.56□□□□□ -1.2
SNHG1-224ENST00000545688 USP53Q70EK8 1073 aa7.56□□□□□ -1.2
SNHG1-224ENST00000545688 ZC3H18Q86VM9 953 aaKnown RBP7.56□□□□□ -1.2
SNHG1-224ENST00000545688 AARSD1Q9BTE6 412 aaKnown RBP7.56□□□□□ -1.2
SNHG1-224ENST00000545688 ARHGEF4Q9NR80 690 aa7.56□□□□□ -1.2
SNHG1-224ENST00000545688 USP40Q9NVE5 1235 aa7.56□□□□□ -1.2
SNHG1-224ENST00000545688 HGSO14964 777 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-224ENST00000545688 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-224ENST00000545688 MSCO60682 206 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 THBS2P35442 1172 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 ITGA1P56199 1179 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 ZC3H6P61129 1189 aaKnown RBP7.55□□□□□ -1.2
SNHG1-224ENST00000545688 CHRNA2Q15822 529 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 CR1LQ2VPA4 569 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 NAALADL2Q58DX5 795 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 EMC4Q5J8M3 183 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 STEAP3Q658P3 488 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 ARRDC4Q8NCT1 418 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 YIPF4Q9BSR8 244 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 CDIP1Q9H305 208 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms