RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DNAJB2P25686 324 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 FAM47CQ5HY64 1035 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 CREB3L3Q68CJ9 461 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 NFRKBQ6P4R8 1299 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 SCLYQ96I15 445 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 CDX2Q99626 313 aaPredicted RBP24.49■■□□□ 1.51
SCARB1-210ENST00000545493 MTA3Q9BTC8 594 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 ANO2Q9NQ90 1003 aa24.49■■□□□ 1.51
SCARB1-210ENST00000545493 MAP3K20Q9NYL2 800 aaKnown RBP24.49■■□□□ 1.51
SCARB1-210ENST00000545493 PNMA6FA0A0J9YX94 578 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-210ENST00000545493 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-210ENST00000545493 KPNA6O60684 536 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 PGM5Q15124 567 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 NECTIN1Q15223 517 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 CASC1Q6TDU7 716 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 SLC17A8Q8NDX2 589 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 HERVK_113Q902F9 699 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 KAT2BQ92831 832 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 EMID1Q96A84 441 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-210ENST00000545493 MAP3K14Q99558 947 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 CXXC1Q9P0U4 656 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-210ENST00000545493 MRVI1Q9Y6F6 885 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 CHD7Q9P2D1 2997 aa24.48■■□□□ 1.51
SCARB1-210ENST00000545493 FRMPD4Q14CM0 1322 aa24.47■■□□□ 1.51
SCARB1-210ENST00000545493 GRXCR1A8MXD5 290 aa24.47■■□□□ 1.51
SCARB1-210ENST00000545493 SAMD3Q8N6K7 520 aa24.47■■□□□ 1.51
SCARB1-210ENST00000545493 PIBF1Q8WXW3 757 aa24.47■■□□□ 1.51
SCARB1-210ENST00000545493 SPZ1Q9BXG8 430 aa24.47■■□□□ 1.51
SCARB1-210ENST00000545493 GCOM1H8Y6P7 765 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-210ENST00000545493 PLEKHA8P1O95397 391 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 SUPT20HL2P0C7V6 817 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 POLR2MP0CAP2 368 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 MYCLP12524 364 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-210ENST00000545493 MCM5P33992 734 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 PBX2P40425 430 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 PTPN11Q06124 597 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-210ENST00000545493 CTCFLQ8NI51 663 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-210ENST00000545493 MYLIPQ8WY64 445 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 PBX4Q9BYU1 374 aa24.46■■□□□ 1.51
SCARB1-210ENST00000545493 MYH7BA7E2Y1 1941 aa24.45■■□□□ 1.51
SCARB1-210ENST00000545493 RXRAP19793 462 aa24.45■■□□□ 1.5
SCARB1-210ENST00000545493 TRAF1Q13077 416 aa24.45■■□□□ 1.5
SCARB1-210ENST00000545493 VSIG10LQ86VR7 867 aa24.45■■□□□ 1.5
SCARB1-210ENST00000545493 TMEM87BQ96K49 555 aa24.45■■□□□ 1.5
SCARB1-210ENST00000545493 CTAGE1Q96RT6 745 aa24.45■■□□□ 1.5
SCARB1-210ENST00000545493 OTOP2Q7RTS6 562 aa24.44■■□□□ 1.5
SCARB1-210ENST00000545493 FCHSD1Q86WN1 690 aa24.44■■□□□ 1.5
SCARB1-210ENST00000545493 GPKOWQ92917 476 aaPredicted RBP eCLIP24.44■■□□□ 1.5
SCARB1-210ENST00000545493 TIFAQ96CG3 184 aa24.44■■□□□ 1.5
SCARB1-210ENST00000545493 LRRC2Q9BYS8 371 aa24.44■■□□□ 1.5
SCARB1-210ENST00000545493 FGBP02675 491 aa24.43■■□□□ 1.5
SCARB1-210ENST00000545493 ZNF286BP0CG31 522 aa24.43■■□□□ 1.5
SCARB1-210ENST00000545493 UBA1P22314 1058 aaKnown RBP24.43■■□□□ 1.5
SCARB1-210ENST00000545493 CCND2P30279 289 aa24.43■■□□□ 1.5
SCARB1-210ENST00000545493 SESTD1Q86VW0 696 aa24.43■■□□□ 1.5
SCARB1-210ENST00000545493 RAB11FIP4Q86YS3 637 aa24.43■■□□□ 1.5
SCARB1-210ENST00000545493 PPTC7Q8NI37 304 aa24.43■■□□□ 1.5
SCARB1-210ENST00000545493 ZFP91Q96JP5 570 aaPredicted RBP24.43■■□□□ 1.5
SCARB1-210ENST00000545493 CCDC69A6NI79 296 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 SORBS3O60504 671 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 F2P00734 622 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 HOXD8P13378 290 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-210ENST00000545493 KIF5BP33176 963 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 LIFRP42702 1097 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 CHMP4BP1P59074 171 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 DGKDQ16760 1214 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 GDF6Q6KF10 455 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-210ENST00000545493 NFXL1Q6ZNB6 911 aa24.42■■□□□ 1.5
SCARB1-210ENST00000545493 SRBD1Q8N5C6 995 aaKnown RBP24.42■■□□□ 1.5
SCARB1-210ENST00000545493 DOCK5Q9H7D0 1870 aa24.41■■□□□ 1.5
SCARB1-210ENST00000545493 PITPNM1O00562 1244 aa24.41■■□□□ 1.5
SCARB1-210ENST00000545493 CASTP20810 708 aaKnown RBP24.41■■□□□ 1.5
SCARB1-210ENST00000545493 SP2Q02086 613 aa24.41■■□□□ 1.5
SCARB1-210ENST00000545493 LAMC2Q13753 1193 aa24.41■■□□□ 1.5
SCARB1-210ENST00000545493 GRIN2CQ14957 1233 aa24.41■■□□□ 1.5
SCARB1-210ENST00000545493 CMTR1Q8N1G2 835 aaKnown RBP24.41■■□□□ 1.5
SCARB1-210ENST00000545493 RRP36Q96EU6 259 aaKnown RBP24.41■■□□□ 1.5
SCARB1-210ENST00000545493 MTIF3Q9H2K0 278 aaKnown RBP24.41■■□□□ 1.5
SCARB1-210ENST00000545493 GGPS1O95749 300 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 FOSL2P15408 326 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 SMARCA1P28370 1054 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 PSEN2P49810 448 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 MRPS9P82933 396 aaKnown RBP24.4■■□□□ 1.5
SCARB1-210ENST00000545493 PTGISQ16647 500 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 HSDL1Q3SXM5 330 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 CELF3Q5SZQ8 465 aaKnown RBP24.4■■□□□ 1.5
SCARB1-210ENST00000545493 MYSM1Q5VVJ2 828 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 DHX37Q8IY37 1157 aaKnown RBP24.4■■□□□ 1.5
SCARB1-210ENST00000545493 RPUSD2Q8IZ73 545 aaKnown RBP24.4■■□□□ 1.5
SCARB1-210ENST00000545493 LZTS2Q9BRK4 669 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 ZNF576Q9H609 170 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 GTF2IRD1Q9UHL9 959 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 NOD1Q9Y239 953 aa24.4■■□□□ 1.5
SCARB1-210ENST00000545493 HAS3O00219 553 aa24.39■■□□□ 1.49
SCARB1-210ENST00000545493 PFKMP08237 780 aa24.39■■□□□ 1.49
SCARB1-210ENST00000545493 KCNV1Q6PIU1 500 aa24.39■■□□□ 1.49
SCARB1-210ENST00000545493 DEFB128Q7Z7B8 93 aa24.39■■□□□ 1.49
SCARB1-210ENST00000545493 SGMS1Q86VZ5 419 aa24.39■■□□□ 1.49
SCARB1-210ENST00000545493 MAFAQ8NHW3 353 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms