RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 LIFRP42702 1097 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 PGM5Q15124 567 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
CHEK1-218ENST00000544373 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
CHEK1-218ENST00000544373 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
CHEK1-218ENST00000544373 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
CHEK1-218ENST00000544373 NOC4LQ9BVI4 516 aaKnown RBP12.4□□□□□ -0.42
CHEK1-218ENST00000544373 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
CHEK1-218ENST00000544373 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 CCDC69A6NI79 296 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 RBAK-RBAKDNI3L0D1 243 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 SORBS3O60504 671 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 GH1P01241 217 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 CYP2C9P11712 490 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 CCL23P55773 120 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 SP2Q02086 613 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 FAM109BQ6ICB4 259 aaPredicted RBP12.39□□□□□ -0.43
CHEK1-218ENST00000544373 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 CCDC82Q8N4S0 544 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 SPZ1Q9BXG8 430 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 BCAS3Q9H6U6 928 aa12.39□□□□□ -0.43
CHEK1-218ENST00000544373 MMP3P08254 477 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 KIF5BP33176 963 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 EXOSC10Q01780 885 aaKnown RBP12.38□□□□□ -0.43
CHEK1-218ENST00000544373 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
CHEK1-218ENST00000544373 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 ZNF365Q70YC5 407 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 TMEM199Q8N511 208 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 KAT2BQ92831 832 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 VWCEQ96DN2 955 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 GUCD1Q96NT3 240 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 MAP3K20Q9NYL2 800 aaKnown RBP12.38□□□□□ -0.43
CHEK1-218ENST00000544373 SLC12A7Q9Y666 1083 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 CHD9Q3L8U1 2897 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 PPIGQ13427 754 aaKnown RBP eCLIP12.38□□□□□ -0.432e-9■■■■□ 25.7
CHEK1-218ENST00000544373 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 FANCBQ8NB91 859 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 RRP36Q96EU6 259 aaKnown RBP12.38□□□□□ -0.43
CHEK1-218ENST00000544373 SCLYQ96I15 445 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 SEZ6LQ9BYH1 1024 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 TTYH1Q9H313 450 aaPredicted RBP12.38□□□□□ -0.43
CHEK1-218ENST00000544373 BRPF3Q9ULD4 1205 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
CHEK1-218ENST00000544373 GRXCR1A8MXD5 290 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 MEIS2O14770 477 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 KPNA6O60684 536 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 CPA1P15085 419 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 SMARCA1P28370 1054 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 MRPS9P82933 396 aaKnown RBP12.37□□□□□ -0.43
CHEK1-218ENST00000544373 SMAD3P84022 425 aaKnown RBP12.37□□□□□ -0.43
CHEK1-218ENST00000544373 TRAF1Q13077 416 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
CHEK1-218ENST00000544373 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 SAMD3Q8N6K7 520 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 EMID1Q96A84 441 aaPredicted RBP12.37□□□□□ -0.43
CHEK1-218ENST00000544373 IL23AQ9NPF7 189 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
CHEK1-218ENST00000544373 UNC80Q8N2C7 3258 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
CHEK1-218ENST00000544373 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 NFRKBQ6P4R8 1299 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
CHEK1-218ENST00000544373 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 SEMA6BQ9H3T3 888 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 VCANP13611 3396 aa12.36□□□□□ -0.43
CHEK1-218ENST00000544373 GGPS1O95749 300 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 ZNF286BP0CG31 522 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 CALM1P0DP23 149 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 CALM2P0DP24 149 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 CALM3P0DP25 149 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 CASTP20810 708 aaKnown RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 UBA1P22314 1058 aaKnown RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 CCND2P30279 289 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 GNAQP50148 359 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 APOA5Q6Q788 366 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 OTOP2Q7RTS6 562 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 DHX37Q8IY37 1157 aaKnown RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
CHEK1-218ENST00000544373 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
CHEK1-218ENST00000544373 TELO2Q9Y4R8 837 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms