RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 MAFGO15525 162 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 CREB3O43889 395 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 ANKRD36BP1Q96IX9 119 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 CNOT10Q9H9A5 744 aaKnown RBP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 NRBP2Q9NSY0 501 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 MAGED2Q9UNF1 606 aaPredicted RBP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 ATP8B3O60423 1300 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 POLR2MP0CAP2 368 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ATP2B4P23634 1241 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ZNF445P59923 1031 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ADCY1Q08828 1119 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 KIF19Q2TAC6 998 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 CCHCR1Q8TD31 782 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 LRRC37BQ96QE4 947 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TRIM45Q9H8W5 580 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ACTR5Q9H9F9 607 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 RRP15Q9Y3B9 282 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 SNX5Q9Y5X3 404 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TTC37Q6PGP7 1564 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 WBP4O75554 376 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TECP42680 631 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 POLGP54098 1239 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 DAB2P98082 770 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 MESDQ14696 234 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 GDAP1Q8TB36 358 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 SNX19Q92543 992 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 SLC8A2Q9UPR5 921 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 COPG1Q9Y678 874 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 SPAG7O75391 227 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ECEL1O95672 775 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 KRT1P04264 644 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 PPARGP37231 505 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TCP10Q12799 353 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 FAM178BQ8IXR5 827 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 LARGE2Q8N3Y3 721 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 OR9Q1Q8NGQ5 310 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 MAGOHBQ96A72 148 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 SPATA17Q96L03 361 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 PALMDQ9NP74 551 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 INTUQ9ULD6 942 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 AOX1Q06278 1338 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ESRRBO95718 433 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 CCDC159P0C7I6 412 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 OCRLQ01968 901 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 RSRC2Q7L4I2 434 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ALKBH8Q96BT7 664 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 H7C1D1 291 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 MYO1FO00160 1098 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TAC1P20366 129 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 EPHB4P54760 987 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 ADAM9Q13443 819 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 GPR162Q16538 588 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TSC22D3Q99576 134 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 SNX25Q9H3E2 840 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 G3BP2Q9UN86 482 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
PCDH9-204ENST00000544246 TRPM2O94759 1503 aa11.25□□□□□ -0.61
PCDH9-204ENST00000544246 PDE8AO60658 829 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 ESRRAP11474 423 aaPredicted RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 HSPA6P17066 643 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 KRT4P19013 534 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 ARL4AP40617 200 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 GRAMD1BQ3KR37 738 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 SGO2Q562F6 1265 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PPP1R2P3Q6NXS1 205 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 MAPKAPK5Q8IW41 473 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 SLC17A8Q8NDX2 589 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 TGFBRAP1Q8WUH2 860 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 NAF1Q96HR8 494 aaKnown RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 WARS2Q9UGM6 360 aaKnown RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 SATB2Q9UPW6 733 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 COL4A3BPQ9Y5P4 624 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 E2F6O75461 281 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 MAPK4P31152 587 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 EHHADHQ08426 723 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 JRKLQ9Y4A0 524 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 WDR64B1ANS9 1081 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 RASSF7Q02833 373 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PCGF5Q86SE9 256 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 DHX38Q92620 1227 aaKnown RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 KIF17Q9P2E2 1029 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 POTEB3A0JP26 581 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 GCP02774 474 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 POTEBQ6S5H4 581 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 HACD3Q9P035 362 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 ARPP21Q9UBL0 812 aaPredicted RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms