RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SAMD3Q8N6K7 520 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 REPS2Q8NFH8 660 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 RBM46Q8TBY0 533 aaKnown RBP22.29■■□□□ 1.16
COPS7A-218ENST00000543939 WNK4Q96J92 1243 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 CSADQ9Y600 493 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 MSH4O15457 936 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 PTMAP06454 111 aaKnown RBP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 IREB2P48200 963 aaKnown RBP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 FMR1Q06787 632 aaKnown RBP eCLIP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 SPIRE1Q08AE8 756 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 COG2Q14746 738 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 MUM1L1Q5H9M0 696 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 CYP2W1Q8TAV3 490 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 ENOX1Q8TC92 643 aaKnown RBP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 CDK5RAP3Q96JB5 506 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 UIMC1Q96RL1 719 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 TAF1DQ9H5J8 278 aaPredicted RBP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 MAP3K20Q9NYL2 800 aaKnown RBP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 KLRC4O43908 158 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 CD44P16070 742 aaKnown RBP22.28■■□□□ 1.16
COPS7A-218ENST00000543939 SEMA3FQ13275 785 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 KCNB1Q14721 858 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 MRFAP1L1Q96HT8 127 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 C7orf25Q9BPX7 421 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 COL20A1Q9P218 1284 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 RPTORQ8N122 1335 aa22.28■■□□□ 1.16
COPS7A-218ENST00000543939 POTECB2RU33 542 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 PPP1R3GB7ZBB8 358 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 CDC25BP30305 580 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 NF2P35240 595 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 OAZ1P54368 228 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 ZNF658Q5TYW1 1059 aaPredicted RBP22.27■■□□□ 1.16
COPS7A-218ENST00000543939 MED15Q96RN5 788 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 TRIM9Q9C026 710 aa22.27■■□□□ 1.16
COPS7A-218ENST00000543939 IQCA1LA6NCM1 817 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 AMPD3Q01432 767 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 ECM1Q16610 540 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 RAD54LQ92698 747 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 HOMER2Q9NSB8 354 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 RABGAP1Q9Y3P9 1069 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 MYPNQ86TC9 1320 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 KDM3AQ9Y4C1 1321 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 LOC285556D6RIA3 1793 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 CCT6AP40227 531 aaKnown RBP22.26■■□□□ 1.15
COPS7A-218ENST00000543939 UBXN2AP68543 259 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 SV2BQ7L1I2 683 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 SMYD4Q8IYR2 804 aaPredicted RBP22.26■■□□□ 1.15
COPS7A-218ENST00000543939 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 LARP4BQ92615 738 aaKnown RBP22.26■■□□□ 1.15
COPS7A-218ENST00000543939 TRERF1Q96PN7 1200 aa22.26■■□□□ 1.15
COPS7A-218ENST00000543939 STAT3P40763 770 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 MCM6Q14566 821 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 KMT5BQ4FZB7 885 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 CEP55Q53EZ4 464 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 KCNK18Q7Z418 384 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 SYTL5Q8TDW5 730 aaPredicted RBP22.25■■□□□ 1.15
COPS7A-218ENST00000543939 NT5C3AQ9H0P0 336 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 FANCLQ9NW38 375 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 VAV3Q9UKW4 847 aa22.25■■□□□ 1.15
COPS7A-218ENST00000543939 ZNF214Q9UL59 606 aaPredicted RBP22.25■■□□□ 1.15
COPS7A-218ENST00000543939 ATP2A1O14983 1001 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 RHOBTB3O94955 611 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 FRMPD4Q14CM0 1322 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 EAPPQ56P03 285 aaPredicted RBP22.24■■□□□ 1.15
COPS7A-218ENST00000543939 TRMT44Q8IYL2 757 aaKnown RBP22.24■■□□□ 1.15
COPS7A-218ENST00000543939 ANKRD13AQ8IZ07 590 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 SPC24Q8NBT2 197 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 HOXC10Q9NYD6 342 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 RIPK3Q9Y572 518 aa22.24■■□□□ 1.15
COPS7A-218ENST00000543939 ESPNB1AK53 854 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 MEIS1O00470 390 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 ATP1A3P13637 1013 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 PPATQ06203 517 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 ZSCAN30Q86W11 494 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 SLC5A5Q92911 643 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 ELP3Q9H9T3 547 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 RNF146Q9NTX7 359 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 NFE2L3Q9Y4A8 694 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 STK24Q9Y6E0 443 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 SPDYE16A6NNV3 312 aaPredicted RBP22.23■■□□□ 1.15
COPS7A-218ENST00000543939 RPS6P62753 249 aaKnown RBP22.23■■□□□ 1.15
COPS7A-218ENST00000543939 FANCCQ00597 558 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 TMEM132BQ14DG7 1078 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 MOB2Q70IA6 237 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 PNMA8AQ86V59 439 aaPredicted RBP22.23■■□□□ 1.15
COPS7A-218ENST00000543939 ERO1BQ86YB8 467 aa22.23■■□□□ 1.15
COPS7A-218ENST00000543939 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.23■■□□□ 1.15
COPS7A-218ENST00000543939 MYMKA6NI61 221 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 GOLGA6L6A8MZA4 724 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 MED24O75448 989 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 ZNF18P17022 549 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 ASIC1P78348 528 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 SETQ01105 290 aaPredicted RBP22.22■■□□□ 1.15
COPS7A-218ENST00000543939 DHX8Q14562 1220 aaKnown RBP22.22■■□□□ 1.15
COPS7A-218ENST00000543939 HAUS3Q68CZ6 603 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 NCAPH2Q6IBW4 605 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 SNRNP48Q6IEG0 339 aaKnown RBP22.22■■□□□ 1.15
COPS7A-218ENST00000543939 KLHL10Q6JEL2 608 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 CNNM4Q6P4Q7 775 aa22.22■■□□□ 1.15
COPS7A-218ENST00000543939 SLC30A10Q6XR72 485 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms