RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 KLHDC9Q8NEP7 349 aa20.52■□□□□ 0.88
TSFM-208ENST00000543727 GTF3C6Q969F1 213 aa20.52■□□□□ 0.88
TSFM-208ENST00000543727 ZSCAN31Q96LW9 406 aaPredicted RBP20.52■□□□□ 0.88
TSFM-208ENST00000543727 LARP6Q9BRS8 491 aaKnown RBP20.52■□□□□ 0.88
TSFM-208ENST00000543727 C6orf50Q9HD87 102 aa20.52■□□□□ 0.88
TSFM-208ENST00000543727 ADCY6O43306 1168 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 TGFB3P10600 412 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 SMPD1P17405 629 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 ME3Q16798 604 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 NOL8Q76FK4 1167 aaKnown RBP20.51■□□□□ 0.87
TSFM-208ENST00000543727 WASF1Q92558 559 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 AP5M1Q9H0R1 490 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 PDGFCQ9NRA1 345 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 SH2B1Q9NRF2 756 aaPredicted RBP20.51■□□□□ 0.87
TSFM-208ENST00000543727 PHF24Q9UPV7 400 aa20.51■□□□□ 0.87
TSFM-208ENST00000543727 MKI67P46013 3256 aaKnown RBP20.51■□□□□ 0.87
TSFM-208ENST00000543727 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.5■□□□□ 0.87
TSFM-208ENST00000543727 ZEB2O60315 1214 aa20.5■□□□□ 0.87
TSFM-208ENST00000543727 PGK1P00558 417 aa20.5■□□□□ 0.87
TSFM-208ENST00000543727 CLK2P49760 499 aaKnown RBP20.5■□□□□ 0.87
TSFM-208ENST00000543727 GALNT17Q6IS24 598 aa20.5■□□□□ 0.87
TSFM-208ENST00000543727 DIS3LQ8TF46 1054 aaKnown RBP20.5■□□□□ 0.87
TSFM-208ENST00000543727 TNRC18O15417 2968 aaPredicted RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 PDE4DIPQ5VU43 2346 aa20.49■□□□□ 0.87
TSFM-208ENST00000543727 C6orf222P0C671 652 aaPredicted RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 XBP1P17861 261 aa20.49■□□□□ 0.87
TSFM-208ENST00000543727 BRDTQ58F21 947 aaPredicted RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 GJC2Q5T442 439 aaPredicted RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 CCDC62Q6P9F0 684 aa20.49■□□□□ 0.87
TSFM-208ENST00000543727 LENG1Q96BZ8 264 aaPredicted RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 INPP4AQ96PE3 977 aaPredicted RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
TSFM-208ENST00000543727 TXNP10599 105 aaKnown RBP20.48■□□□□ 0.87
TSFM-208ENST00000543727 MYCLP12524 364 aaPredicted RBP20.48■□□□□ 0.87
TSFM-208ENST00000543727 MCM2P49736 904 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 CPT1AP50416 773 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 UBE2SQ16763 222 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 CCSAPQ6IQ19 270 aaPredicted RBP20.48■□□□□ 0.87
TSFM-208ENST00000543727 REXO1Q8N1G1 1221 aaKnown RBP20.48■□□□□ 0.87
TSFM-208ENST00000543727 IL31RAQ8NI17 732 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 EMID1Q96A84 441 aaPredicted RBP20.48■□□□□ 0.87
TSFM-208ENST00000543727 CDHR1Q96JP9 859 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 PCDHA6Q9UN73 950 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 PCDHA8Q9Y5H6 950 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 MRVI1Q9Y6F6 885 aa20.48■□□□□ 0.87
TSFM-208ENST00000543727 CABYRO75952 493 aa20.47■□□□□ 0.87
TSFM-208ENST00000543727 ICAM3P32942 547 aa20.47■□□□□ 0.87
TSFM-208ENST00000543727 FSCN1Q16658 493 aaKnown RBP20.47■□□□□ 0.87
TSFM-208ENST00000543727 GNASQ5JWF2 1037 aa20.47■□□□□ 0.87
TSFM-208ENST00000543727 C1orf53Q5VUE5 145 aa20.47■□□□□ 0.87
TSFM-208ENST00000543727 SEPT14Q6ZU15 432 aa20.47■□□□□ 0.87
TSFM-208ENST00000543727 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
TSFM-208ENST00000543727 CTAGE5O15320 804 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 MAFGO15525 162 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 FIBPO43427 364 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 GH1P01241 217 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 SREBF1P36956 1147 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 MRPS9P82933 396 aaKnown RBP20.46■□□□□ 0.87
TSFM-208ENST00000543727 KCNA10Q16322 511 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 NLRX1Q86UT6 975 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 DAGLBQ8NCG7 672 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 GPRASP2Q96D09 838 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 SEZ6LQ9BYH1 1024 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 ANO3Q9BYT9 981 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 VPS54Q9P1Q0 977 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 DDX41Q9UJV9 622 aaKnown RBP20.46■□□□□ 0.87
TSFM-208ENST00000543727 ELP1O95163 1332 aa20.46■□□□□ 0.87
TSFM-208ENST00000543727 DYNC1LI2O43237 492 aaPredicted RBP20.45■□□□□ 0.86
TSFM-208ENST00000543727 KPNA6O60684 536 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 RGS20O76081 388 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 LARGE1O95461 756 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 CTDNEP1O95476 244 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
TSFM-208ENST00000543727 ACLYP53396 1101 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 SNX17Q15036 470 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 NSUN7Q8NE18 718 aaKnown RBP20.45■□□□□ 0.86
TSFM-208ENST00000543727 SENP6Q9GZR1 1112 aaPredicted RBP20.45■□□□□ 0.86
TSFM-208ENST00000543727 POLR3EQ9NVU0 708 aa20.45■□□□□ 0.86
TSFM-208ENST00000543727 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
TSFM-208ENST00000543727 DOCK5Q9H7D0 1870 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 A0A1W2PQ45 241 aaPredicted RBP20.44■□□□□ 0.86
TSFM-208ENST00000543727 A0A1W2PQY0 241 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 A6NJR5 290 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 ARIH2O95376 493 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 ASGR1P07306 291 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 NLRP5P59047 1200 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 LAMC2Q13753 1193 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 NECAB1Q8N987 351 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 GIMAP8Q8ND71 665 aaPredicted RBP20.44■□□□□ 0.86
TSFM-208ENST00000543727 GLT1D1Q96MS3 346 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 SENP7Q9BQF6 1050 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 PCDHA4Q9UN74 947 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 SCN10AQ9Y5Y9 1956 aa20.44■□□□□ 0.86
TSFM-208ENST00000543727 MYADML2A6NDP7 307 aa20.43■□□□□ 0.86
TSFM-208ENST00000543727 SPATA31C2B4DYI2 1134 aa20.43■□□□□ 0.86
TSFM-208ENST00000543727 HMGN5P82970 282 aaKnown RBP20.43■□□□□ 0.86
TSFM-208ENST00000543727 NEDD9Q14511 834 aa20.43■□□□□ 0.86
TSFM-208ENST00000543727 NIPA1Q7RTP0 329 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms