RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 RRP36Q96EU6 259 aaKnown RBP21.52■■□□□ 1.03
TMED3-204ENST00000543455 ZFP91Q96JP5 570 aaPredicted RBP21.52■■□□□ 1.03
TMED3-204ENST00000543455 LZTS2Q9BRK4 669 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 MTG1Q9BT17 334 aaPredicted RBP21.52■■□□□ 1.03
TMED3-204ENST00000543455 ALDH8A1Q9H2A2 487 aaPredicted RBP21.52■■□□□ 1.03
TMED3-204ENST00000543455 SLC12A7Q9Y666 1083 aa21.52■■□□□ 1.03
TMED3-204ENST00000543455 hCG_1642624A0A1W2PR95 340 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 TLR3O15455 904 aaKnown RBP21.51■■□□□ 1.03
TMED3-204ENST00000543455 CALM1P0DP23 149 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 CALM2P0DP24 149 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 CALM3P0DP25 149 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 MYCLP12524 364 aaPredicted RBP21.51■■□□□ 1.03
TMED3-204ENST00000543455 GNAQP50148 359 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 C16orf59Q7L2K0 433 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 DHX32Q7L7V1 743 aaKnown RBP21.51■■□□□ 1.03
TMED3-204ENST00000543455 FCHSD1Q86WN1 690 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 MICU3Q86XE3 530 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 FANCBQ8NB91 859 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 GPKOWQ92917 476 aaPredicted RBP eCLIP21.51■■□□□ 1.03
TMED3-204ENST00000543455 PPP1R12CQ9BZL4 782 aa21.51■■□□□ 1.03
TMED3-204ENST00000543455 GH1P01241 217 aa21.5■■□□□ 1.03
TMED3-204ENST00000543455 MMP3P08254 477 aa21.5■■□□□ 1.03
TMED3-204ENST00000543455 CPA1P15085 419 aa21.5■■□□□ 1.03
TMED3-204ENST00000543455 CYP2C18P33260 490 aa21.5■■□□□ 1.03
TMED3-204ENST00000543455 NBPF20Q3BBV1 942 aa21.5■■□□□ 1.03
TMED3-204ENST00000543455 SEZ6LQ9BYH1 1024 aa21.5■■□□□ 1.03
TMED3-204ENST00000543455 MEIS2O14770 477 aa21.49■■□□□ 1.03
TMED3-204ENST00000543455 HSPA4P34932 840 aa21.49■■□□□ 1.03
TMED3-204ENST00000543455 FUT2Q10981 343 aa21.49■■□□□ 1.03
TMED3-204ENST00000543455 USP17L6PQ6QN14 398 aa21.49■■□□□ 1.03
TMED3-204ENST00000543455 KAT2BQ92831 832 aa21.49■■□□□ 1.03
TMED3-204ENST00000543455 NOC4LQ9BVI4 516 aaKnown RBP21.49■■□□□ 1.03
TMED3-204ENST00000543455 TRMT13Q9NUP7 481 aaKnown RBP21.49■■□□□ 1.03
TMED3-204ENST00000543455 DOCK5Q9H7D0 1870 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 CSF2RAP15509 400 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 MRPS9P82933 396 aaKnown RBP21.48■■□□□ 1.03
TMED3-204ENST00000543455 SP2Q02086 613 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 CCDC82Q8N4S0 544 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 EMID1Q96A84 441 aaPredicted RBP21.48■■□□□ 1.03
TMED3-204ENST00000543455 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.48■■□□□ 1.033e-6■■■■□ 22.3
TMED3-204ENST00000543455 FAM217BQ9NTX9 383 aaPredicted RBP21.48■■□□□ 1.03
TMED3-204ENST00000543455 SNX14Q9Y5W7 946 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 MRVI1Q9Y6F6 885 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 CNTNAP5Q8WYK1 1306 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 COL6A3P12111 3177 aa21.48■■□□□ 1.03
TMED3-204ENST00000543455 KPNA6O60684 536 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 KRT32Q14532 448 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 BRDTQ58F21 947 aaPredicted RBP21.47■■□□□ 1.03
TMED3-204ENST00000543455 DEFB123Q8N688 67 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 VWCEQ96DN2 955 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 WNT8AQ9H1J5 351 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 HIPK3Q9H422 1215 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 BCAS3Q9H6U6 928 aa21.47■■□□□ 1.03
TMED3-204ENST00000543455 PIK3CDO00329 1044 aa21.46■■□□□ 1.03
TMED3-204ENST00000543455 CCND2P30279 289 aa21.46■■□□□ 1.03
TMED3-204ENST00000543455 SEMA3FQ13275 785 aa21.46■■□□□ 1.03
TMED3-204ENST00000543455 TMEM240Q5SV17 173 aa21.46■■□□□ 1.03
TMED3-204ENST00000543455 SEC63Q9UGP8 760 aaKnown RBP21.46■■□□□ 1.03
TMED3-204ENST00000543455 SCN5AQ14524 2016 aa21.46■■□□□ 1.03
TMED3-204ENST00000543455 CYP2C9P11712 490 aa21.45■■□□□ 1.03
TMED3-204ENST00000543455 HOXD8P13378 290 aaPredicted RBP21.45■■□□□ 1.03
TMED3-204ENST00000543455 MYSM1Q5VVJ2 828 aa21.45■■□□□ 1.03
TMED3-204ENST00000543455 NFRKBQ6P4R8 1299 aa21.45■■□□□ 1.03
TMED3-204ENST00000543455 RNPC3Q96LT9 517 aaKnown RBP21.45■■□□□ 1.03
TMED3-204ENST00000543455 CTAGE1Q96RT6 745 aa21.45■■□□□ 1.03
TMED3-204ENST00000543455 MTMR10Q9NXD2 777 aa21.45■■□□□ 1.03
TMED3-204ENST00000543455 SORBS3O60504 671 aa21.45■■□□□ 1.02
TMED3-204ENST00000543455 ACRP10323 421 aa21.45■■□□□ 1.02
TMED3-204ENST00000543455 UBA1P22314 1058 aaKnown RBP21.45■■□□□ 1.02
TMED3-204ENST00000543455 PPIGQ13427 754 aaKnown RBP eCLIP21.45■■□□□ 1.02
TMED3-204ENST00000543455 RASIP1Q5U651 963 aa21.45■■□□□ 1.02
TMED3-204ENST00000543455 TYW1BQ6NUM6 668 aa21.45■■□□□ 1.02
TMED3-204ENST00000543455 TMEM199Q8N511 208 aa21.45■■□□□ 1.02
TMED3-204ENST00000543455 PPTC7Q8NI37 304 aa21.45■■□□□ 1.02
TMED3-204ENST00000543455 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.02
TMED3-204ENST00000543455 INPP4AQ96PE3 977 aaPredicted RBP21.45■■□□□ 1.02
TMED3-204ENST00000543455 CDH23Q9H251 3354 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 KLF18A0A0U1RQI7 1052 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 ZBTB43O43298 467 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 CDC27P30260 824 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 CCL23P55773 120 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 LAMC2Q13753 1193 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 HSDL1Q3SXM5 330 aa21.44■■□□□ 1.02
TMED3-204ENST00000543455 CELF3Q5SZQ8 465 aaKnown RBP21.44■■□□□ 1.02
TMED3-204ENST00000543455 TRIP12Q14669 1992 aaPredicted RBP21.43■■□□□ 1.02
TMED3-204ENST00000543455 TANC1Q9C0D5 1861 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 GGPS1O95749 300 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 HMGB1P09429 215 aaKnown RBP21.43■■□□□ 1.02
TMED3-204ENST00000543455 UBE2SQ16763 222 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 RTN1Q16799 776 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 FAM47CQ5HY64 1035 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 WWC2Q6AWC2 1192 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 FAM109BQ6ICB4 259 aaPredicted RBP21.43■■□□□ 1.02
TMED3-204ENST00000543455 ZNF365Q70YC5 407 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
TMED3-204ENST00000543455 SMARCC2Q8TAQ2 1214 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 IL23AQ9NPF7 189 aa21.43■■□□□ 1.02
TMED3-204ENST00000543455 RBM28Q9NW13 759 aaKnown RBP21.43■■□□□ 1.02
TMED3-204ENST00000543455 ZNF286BP0CG31 522 aa21.42■■□□□ 1.02
TMED3-204ENST00000543455 TGFB3P10600 412 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms