RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 CHST13Q8NET6 341 aa7.34□□□□□ -1.23
MRPL48-212ENST00000543374 LOXL4Q96JB6 756 aa7.34□□□□□ -1.23
MRPL48-212ENST00000543374 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.34□□□□□ -1.23
MRPL48-212ENST00000543374 SIT1Q9Y3P8 196 aa7.34□□□□□ -1.23
MRPL48-212ENST00000543374 TIMM13Q9Y5L4 95 aaPredicted RBP7.34□□□□□ -1.23
MRPL48-212ENST00000543374 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 SGSM2O43147 1006 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 MYO1BO43795 1136 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 CYP7B1O75881 506 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 THBDP07204 575 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 NASPP49321 788 aaPredicted RBP7.33□□□□□ -1.24
MRPL48-212ENST00000543374 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
MRPL48-212ENST00000543374 CHRNA2Q15822 529 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 GLB1LQ6UWU2 654 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 MILR1Q7Z6M3 343 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 METTL16Q86W50 562 aaKnown RBP7.33□□□□□ -1.24
MRPL48-212ENST00000543374 DPF3Q92784 378 aa7.33□□□□□ -1.24
MRPL48-212ENST00000543374 LCORQ96JN0 433 aaPredicted RBP7.33□□□□□ -1.24
MRPL48-212ENST00000543374 ZNF536O15090 1300 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 NKX3-2P78367 333 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 PLEKHH3Q7Z736 793 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 TRIM59Q8IWR1 403 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 YIPF4Q9BSR8 244 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 NKX2-4Q9H2Z4 354 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 APEX2Q9UBZ4 518 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 INVSQ9Y283 1065 aa7.32□□□□□ -1.24
MRPL48-212ENST00000543374 RECKO95980 971 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 TNFRSF1AP19438 455 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 HOXC12P31275 282 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 ZXDAP98168 799 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 MCTP2Q6DN12 878 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 TEX2Q8IWB9 1127 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 TXNDC5Q8NBS9 432 aaKnown RBP7.31□□□□□ -1.24
MRPL48-212ENST00000543374 TRMT2BQ96GJ1 504 aaKnown RBP7.31□□□□□ -1.24
MRPL48-212ENST00000543374 X6R8D5 127 aa7.31□□□□□ -1.24
MRPL48-212ENST00000543374 ITGA1P56199 1179 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 MBLAC2Q68D91 279 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 CEP68Q76N32 757 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 NT5DC4Q86YG4 428 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 Q8N1Y9 231 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 DVL3Q92997 716 aaPredicted RBP7.3□□□□□ -1.24
MRPL48-212ENST00000543374 PPP1R14AQ96A00 147 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 C8orf49Q96NF6 230 aa7.3□□□□□ -1.24
MRPL48-212ENST00000543374 COA3Q9Y2R0 106 aaPredicted RBP7.3□□□□□ -1.24
MRPL48-212ENST00000543374 CCDC9Q9Y3X0 531 aaKnown RBP7.3□□□□□ -1.24
MRPL48-212ENST00000543374 DDX3XO00571 662 aaKnown RBP eCLIP7.29□□□□□ -1.24
MRPL48-212ENST00000543374 CPP00450 1065 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 ZNF20P17024 532 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 KCNAB2Q13303 367 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 PRR31Q5SQ13 230 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 FAM26EQ8N5C1 309 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 FRS2Q8WU20 508 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 DIO2Q92813 273 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 TMEM169Q96HH4 297 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 MRGPRX3Q96LB0 322 aa7.29□□□□□ -1.24
MRPL48-212ENST00000543374 HGSO14964 777 aaPredicted RBP7.28□□□□□ -1.24
MRPL48-212ENST00000543374 CYP1A1P04798 512 aaPredicted RBP7.28□□□□□ -1.24
MRPL48-212ENST00000543374 INF2Q27J81 1249 aa7.28□□□□□ -1.24
MRPL48-212ENST00000543374 PRAMEF18Q5VWM3 479 aa7.28□□□□□ -1.24
MRPL48-212ENST00000543374 NPM2Q86SE8 214 aaKnown RBP7.28□□□□□ -1.24
MRPL48-212ENST00000543374 WRNIP1Q96S55 665 aa7.28□□□□□ -1.24
MRPL48-212ENST00000543374 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
MRPL48-212ENST00000543374 MATN3O15232 486 aa7.27□□□□□ -1.25
MRPL48-212ENST00000543374 LAMTOR5O43504 91 aa7.27□□□□□ -1.25
MRPL48-212ENST00000543374 C9orf131Q5VYM1 1079 aa7.27□□□□□ -1.25
MRPL48-212ENST00000543374 TOE1Q96GM8 510 aaKnown RBP7.27□□□□□ -1.25
MRPL48-212ENST00000543374 CLIC6Q96NY7 704 aa7.27□□□□□ -1.25
MRPL48-212ENST00000543374 CDK5RAP1Q96SZ6 601 aaKnown RBP7.27□□□□□ -1.25
MRPL48-212ENST00000543374 L2HGDHQ9H9P8 463 aa7.27□□□□□ -1.25
MRPL48-212ENST00000543374 SRRDQ9UH36 339 aa7.27□□□□□ -1.25
MRPL48-212ENST00000543374 H7BY64 318 aa7.26□□□□□ -1.25
MRPL48-212ENST00000543374 MEFVO15553 781 aaPredicted RBP7.26□□□□□ -1.25
MRPL48-212ENST00000543374 SCG5P05408 212 aa7.26□□□□□ -1.25
MRPL48-212ENST00000543374 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
MRPL48-212ENST00000543374 TESK1Q15569 626 aa7.26□□□□□ -1.25
MRPL48-212ENST00000543374 ACBD5Q5T8D3 534 aaPredicted RBP7.26□□□□□ -1.25
MRPL48-212ENST00000543374 KISS1RQ969F8 398 aaPredicted RBP7.26□□□□□ -1.25
MRPL48-212ENST00000543374 SSBP3Q9BWW4 388 aaPredicted RBP7.26□□□□□ -1.25
MRPL48-212ENST00000543374 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
MRPL48-212ENST00000543374 TMEM168Q9H0V1 697 aa7.26□□□□□ -1.25
MRPL48-212ENST00000543374 LRP2BPQ9P2M1 347 aa7.26□□□□□ -1.25
MRPL48-212ENST00000543374 AKAP8O43823 692 aaKnown RBP7.25□□□□□ -1.25
MRPL48-212ENST00000543374 MAFKO60675 156 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 CR1LQ2VPA4 569 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 STK32CQ86UX6 486 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 FAM169BQ8N8A8 192 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 ANAPC16Q96DE5 110 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 TMEM209Q96SK2 561 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 TGIF2Q9GZN2 237 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 INPP5FQ9Y2H2 1132 aa7.25□□□□□ -1.25
MRPL48-212ENST00000543374 NPEPPSL1A6NEC2 478 aa7.24□□□□□ -1.25
MRPL48-212ENST00000543374 SNRPB2P08579 225 aaKnown RBP7.24□□□□□ -1.25
MRPL48-212ENST00000543374 ZNF28P17035 718 aa7.24□□□□□ -1.25
MRPL48-212ENST00000543374 FPR2P25090 351 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms