RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 FAM84BQ96KN1 310 aaPredicted RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC42Q96M95 316 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 TULP1O00294 542 aaPredicted RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 PES1O00541 588 aaKnown RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 ERLIN2O94905 339 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 IPO7O95373 1038 aaKnown RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 MYBP10242 640 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 KIF5BP33176 963 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 UBA7P41226 1012 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 MTIF2P46199 727 aaKnown RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 PDE4DQ08499 809 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 SPA17Q15506 151 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 TXNRD1Q16881 649 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 INF2Q27J81 1249 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC96Q2M329 555 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 MCTP2Q6DN12 878 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC70Q6NSX1 233 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 FOXR2Q6PJQ5 311 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 FBXO33Q7Z6M2 555 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 CABP7Q86V35 215 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 MICALL1Q8N3F8 863 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 PRPF38AQ8NAV1 312 aaKnown RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 MTMR8Q96EF0 704 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 PLIN2Q99541 437 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 HINFPQ9BQA5 517 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 ATP8A2Q9NTI2 1148 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 RBM12Q9NTZ6 932 aaKnown RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 BARHL2Q9NY43 387 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 SPATA31A5Q5VU36 1347 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 SPATA31A7Q8IWB4 1347 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 ZNF233A6NK53 670 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 MECOMQ03112 1051 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 EHHADHQ08426 723 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 ARHGAP27Q6ZUM4 889 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 DGKHQ86XP1 1220 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 EEF2KMTQ96G04 330 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 ARPP21Q9UBL0 812 aaPredicted RBP6.23□□□□□ -1.41
ZEB1-209ENST00000542879 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC194A0A1B0GVG4 234 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 SSU72P8A0A1W2PR75 194 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 NCK2O43639 380 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 FSBPO95073 299 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 GLI1P08151 1106 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 HNRNPH1P31943 449 aaKnown RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 NT5C2P49902 561 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 LIG3P49916 1009 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 MRPS25P82663 173 aaKnown RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 CNNM4Q6P4Q7 775 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 PDXDC1Q6P996 788 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 LRRC55Q6ZSA7 311 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 POTEDQ86YR6 584 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 C2CD5Q86YS7 1000 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 RNF10Q8N5U6 811 aaKnown RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 EDEM3Q9BZQ6 932 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 NDST4Q9H3R1 872 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 PALM3A6NDB9 673 aaPredicted RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 LRRC53A6NM62 1247 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 SRRM3A6NNA2 597 aaPredicted RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 HSF2BPO75031 334 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 OR52Z1P0C646 297 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 FAM153BP0C7A2 387 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC172P0C7W6 258 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 CXCR5P32302 372 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 APBA1Q02410 837 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 MAN2A1Q16706 1144 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 FAM153CQ494X1 144 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 FKBP15Q5T1M5 1219 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 C3orf67Q6ZVT6 689 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 YTHDF3Q7Z739 585 aaKnown RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 PNMA1Q8ND90 353 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 ALS2CR12Q96Q35 445 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 ZMYND12Q9H0C1 365 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 TCP11L1Q9NUJ3 509 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 BLOC1S4Q9NUP1 217 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 BSDC1Q9NW68 430 aaPredicted RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 RNF14Q9UBS8 474 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 RGS17Q9UGC6 210 aaPredicted RBP6.22□□□□□ -1.41
ZEB1-209ENST00000542879 FAM153AQ9UHL3 310 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 IRS2Q9Y4H2 1338 aa6.22□□□□□ -1.41
ZEB1-209ENST00000542879 SHTN1A0MZ66 631 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 CARSP49589 748 aaKnown RBP6.21□□□□□ -1.41
ZEB1-209ENST00000542879 ASIC1P78348 528 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 KCNMA1Q12791 1236 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 GRB10Q13322 594 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 PDCLQ13371 301 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC178Q5BJE1 867 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 HPS3Q969F9 1004 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 DRC1Q96MC2 740 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 CRNKL1Q9BZJ0 848 aaKnown RBP6.21□□□□□ -1.41
ZEB1-209ENST00000542879 CCDC87Q9NVE4 849 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 TSKSQ9UJT2 592 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 TMEM59LQ9UK28 342 aa6.21□□□□□ -1.41
ZEB1-209ENST00000542879 GRID2IPA4D2P6 1211 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 EDIL3O43854 480 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 TLR2O60603 784 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 NOL4O94818 638 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 ZBTB48P10074 688 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 EVA1CP58658 441 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SATB1Q01826 763 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SF3B3Q15393 1217 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms