RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 DHX9Q08211 1270 aaKnown RBP14.26□□□□□ -0.13
TNC-212ENST00000542877 GRM1Q13255 1194 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 CUL4BQ13620 913 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 GRAMD1CQ8IYS0 662 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
TNC-212ENST00000542877 TMEM232C9JQI7 657 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 SERPING1P05155 500 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 SERPINB6P35237 376 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 NECTIN1Q15223 517 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 RBBP5Q15291 538 aaKnown RBP14.25□□□□□ -0.13
TNC-212ENST00000542877 NIM1KQ8IY84 436 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 ZNF653Q96CK0 615 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 PPP1R9AQ9ULJ8 1098 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 MAD1L1Q9Y6D9 718 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 KDM5CP41229 1560 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 MOCS3O95396 460 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 MAPK4P31152 587 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 EIF3BP55884 814 aaKnown RBP14.25□□□□□ -0.13
TNC-212ENST00000542877 PROSER3Q2NL68 480 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 MMS19Q96T76 1030 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 EIF4A3P38919 411 aaKnown RBP14.25□□□□□ -0.13
TNC-212ENST00000542877 PABPC4Q13310 644 aaKnown RBP eCLIP14.25□□□□□ -0.13
TNC-212ENST00000542877 SGO2Q562F6 1265 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 TUBB6Q9BUF5 446 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 LIFRP42702 1097 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 ASPHQ12797 758 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 POLA2Q14181 598 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 LRCH2Q5VUJ6 765 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 METTL13Q8N6R0 699 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 NRBP2Q9NSY0 501 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 PCDHA13Q9Y5I0 950 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 ZNF804BA4D1E1 1349 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 LARGE1O95461 756 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 PDE1CQ14123 709 aaPredicted RBP14.25□□□□□ -0.13
TNC-212ENST00000542877 CCHCR1Q8TD31 782 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 KLHL29Q96CT2 875 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 IFT122Q9HBG6 1241 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 THEGQ9P2T0 379 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 CD2APQ9Y5K6 639 aa14.25□□□□□ -0.13
TNC-212ENST00000542877 ATP7BP35670 1465 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 A0A087WWV3 80 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 PAGE5Q96GU1 130 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 SGK1O00141 431 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 PFDN6O15212 129 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 POLGP54098 1239 aaPredicted RBP14.24□□□□□ -0.13
TNC-212ENST00000542877 NR5A1Q13285 461 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 EMBQ6PCB8 327 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 FBXO38Q6PIJ6 1188 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 NLRP7Q8WX94 980 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 ANAPC5Q9UJX4 755 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 PPIP5K2O43314 1243 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 GSTA1P08263 222 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 GSTA2P09210 222 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 COG7P83436 770 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 ACCSQ96QU6 501 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 ABCB6Q9NP58 842 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 A6NJR5 290 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 PNMA6AP0CW24 399 aaPredicted RBP14.24□□□□□ -0.13
TNC-212ENST00000542877 PDE1BQ01064 536 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 PPP2R5AQ15172 486 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 LRRC41Q15345 812 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 FAM133AQ8N9E0 248 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 RASGRP4Q8TDF6 673 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 TBCKQ8TEA7 893 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 TRIM4Q9C037 500 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 TXLNGQ9NUQ3 528 aa14.24□□□□□ -0.13
TNC-212ENST00000542877 HMGB1P1B2RPK0 211 aaPredicted RBP14.23□□□□□ -0.13
TNC-212ENST00000542877 FTCDO95954 541 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 NR1D1P20393 614 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 PTPN21Q16825 1174 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 ARL6IP4Q66PJ3 421 aaKnown RBP14.23□□□□□ -0.13
TNC-212ENST00000542877 TTBK2Q6IQ55 1244 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 RNF168Q8IYW5 571 aaPredicted RBP14.23□□□□□ -0.13
TNC-212ENST00000542877 NEK9Q8TD19 979 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 PCDHB4Q9Y5E5 795 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 GPC4O75487 556 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 SCYL3Q8IZE3 742 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 SEPT10Q9P0V9 454 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 LRRIQ4A6NIV6 560 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 HNRNPDLO14979 420 aaKnown RBP14.23□□□□□ -0.13
TNC-212ENST00000542877 MFAP3LO75121 409 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 CUL1Q13616 776 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 ABCB5Q2M3G0 1257 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 MMEL1Q495T6 779 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 TMTC3Q6ZXV5 915 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 WDR11Q9BZH6 1224 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 MGEA5O60502 916 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 CXCR5P32302 372 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 TCP11X2Q5H9J9 407 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 AP1ARQ63HQ0 302 aa14.23□□□□□ -0.13
TNC-212ENST00000542877 NME8Q8N427 588 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms