RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 RFXAPO00287 272 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CDKL5O76039 1030 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CA3P07451 260 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 SUPT20HL2P0C7V6 817 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CALM1P0DP23 149 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CALM2P0DP24 149 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CALM3P0DP25 149 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 FDX1P10109 184 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 PSMC6P62333 389 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 SCRN1Q12765 414 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CPLX2Q6PUV4 134 aaKnown RBP13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 APOA5Q6Q788 366 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 NFXL1Q6ZNB6 911 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 DGKHQ86XP1 1220 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 MKL1Q969V6 931 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 Q9Y3F1 56 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
SRGAP1-205ENST00000542841 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 ZBTB43O43298 467 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 ACTN1P12814 892 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 SMPD1P17405 629 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 TTLL4Q14679 1199 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 HLA-CQ95604 372 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 INCENPQ9NQS7 918 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
SRGAP1-205ENST00000542841 IGKV6D-41A0A0C4DH26 115 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 TLL1O43897 1013 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 PRDM1O75626 825 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 DDAH1O94760 285 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 TTLL1O95922 423 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 TSPY3P0CV98 308 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 TSPY8P0CW00 308 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 BMP3P12645 472 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 GJB2P29033 226 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 STAT2P52630 851 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 TFAP4Q01664 338 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 STK3Q13188 491 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 DEFB128Q7Z7B8 93 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 NECAB1Q8N987 351 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 SLC9A7Q96T83 725 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 MTMR4Q9NYA4 1195 aa13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
SRGAP1-205ENST00000542841 KIF28PB7ZC32 967 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 CPLX1O14810 134 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 GPR37L1O60883 481 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 PTGS1P23219 599 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 NOVP48745 357 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 TKFCQ3LXA3 575 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 SLFN13Q68D06 897 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 FBXO16Q8IX29 292 aaPredicted RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 PHOSPHO2Q8TCD6 241 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 ARNTL2Q8WYA1 636 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 TRERF1Q96PN7 1200 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 PDGFCQ9NRA1 345 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 TRMT13Q9NUP7 481 aaKnown RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 RBM28Q9NW13 759 aaKnown RBP13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 MYH6P13533 1939 aa13.33□□□□□ -0.28
SRGAP1-205ENST00000542841 PRRC2BQ5JSZ5 2229 aaKnown RBP13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 EPOPA6NHQ4 379 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 BRD1O95696 1058 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 CYP2C9P11712 490 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 ALAS1P13196 640 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 RFC2P35250 354 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 KRT40Q6A162 431 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 CHURC1Q8WUH1 139 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
SRGAP1-205ENST00000542841 VTA1Q9NP79 307 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms