RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 LIG3P49916 1009 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 GRB10Q13322 594 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 KLHDC7AQ5VTJ3 777 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 PDXDC1Q6P996 788 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 ZIM3Q96PE6 472 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 LZTS2Q9BRK4 669 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
DDX11-223ENST00000542838 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 CFAP221Q4G0U5 840 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 SH3RF3Q8TEJ3 882 aaPredicted RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 CDK5RAP3Q96JB5 506 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 BLOC1S4Q9NUP1 217 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 MAST2Q6P0Q8 1798 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 ERLIN2O94905 339 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 SLC1A4P43007 532 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 GLE1Q53GS7 698 aaKnown RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 VAT1LQ9HCJ6 419 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 BIN2Q9UBW5 565 aaPredicted RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 SAMM50Q9Y512 469 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 ABCB11O95342 1321 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 PVALEFA0A1B0GWK0 134 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 SKOR1P84550 965 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 ASTE1Q2TB18 679 aaPredicted RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 IFT20Q8IY31 132 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
DDX11-223ENST00000542838 SPZ1Q9BXG8 430 aa14.3□□□□□ -0.12
DDX11-223ENST00000542838 NT5C2P49902 561 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 DNA2P51530 1060 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 LRRC63Q05C16 580 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 PDCLQ13371 301 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 NNTQ13423 1086 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 TMC4Q7Z404 712 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 TXNRD3Q86VQ6 643 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 SH2D3CQ8N5H7 860 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 RNF10Q8N5U6 811 aaKnown RBP14.29□□□□□ -0.12
DDX11-223ENST00000542838 NLRC4Q9NPP4 1024 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 SSU72P8A0A1W2PR75 194 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 CARSP49589 748 aaKnown RBP14.29□□□□□ -0.12
DDX11-223ENST00000542838 TGFBRAP1Q8WUH2 860 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 IFT81Q8WYA0 676 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
DDX11-223ENST00000542838 PNMA5Q96PV4 448 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 TSG101Q99816 390 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 ANKRD2Q9GZV1 360 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 EPB41L5Q9HCM4 733 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 NFU1Q9UMS0 254 aa14.29□□□□□ -0.12
DDX11-223ENST00000542838 HEXIM1O94992 359 aaKnown RBP14.28□□□□□ -0.12
DDX11-223ENST00000542838 KRT14P02533 472 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 GLI1P08151 1106 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 ATP1A2P50993 1020 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 LRRC41Q15345 812 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 CFAP58Q5T655 872 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 HGSNATQ68CP4 663 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 TMEM260Q9NX78 707 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
DDX11-223ENST00000542838 A6NNZ2 444 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 GUCY2DQ02846 1103 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 KCNMA1Q12791 1236 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 CALCRLQ16602 461 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 TUBB8Q3ZCM7 444 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 USP17L2Q6R6M4 530 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 LRRC55Q6ZSA7 311 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 EDEM3Q9BZQ6 932 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 SAP30BPQ9UHR5 308 aaKnown RBP14.28□□□□□ -0.12
DDX11-223ENST00000542838 ROBO3Q96MS0 1386 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 ESYT3A0FGR9 886 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 NDUFAB1O14561 156 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
DDX11-223ENST00000542838 FAM153BP0C7A2 387 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 RASA1P20936 1047 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 FAM153CQ494X1 144 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 SLC9C1Q4G0N8 1177 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 REXO1Q8N1G1 1221 aaKnown RBP14.28□□□□□ -0.12
DDX11-223ENST00000542838 GDF3Q9NR23 364 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 FAM153AQ9UHL3 310 aa14.28□□□□□ -0.12
DDX11-223ENST00000542838 ZSCAN5CA6NGD5 496 aaPredicted RBP14.27□□□□□ -0.12
DDX11-223ENST00000542838 ZPR1O75312 459 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 PALMO75781 387 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 PAK2Q13177 524 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.12
DDX11-223ENST00000542838 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 MMS22LQ6ZRQ5 1243 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 GLIS3Q8NEA6 775 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 PIGSQ96S52 555 aa14.27□□□□□ -0.12
DDX11-223ENST00000542838 FTCDO95954 541 aa14.27□□□□□ -0.13
DDX11-223ENST00000542838 INPP5BP32019 993 aa14.27□□□□□ -0.13
DDX11-223ENST00000542838 DDB1Q16531 1140 aa14.27□□□□□ -0.13
DDX11-223ENST00000542838 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.13
DDX11-223ENST00000542838 CERS3Q8IU89 383 aa14.27□□□□□ -0.13
DDX11-223ENST00000542838 MAPKAPK5Q8IW41 473 aa14.27□□□□□ -0.13
DDX11-223ENST00000542838 DDX12PQ92771 950 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms