RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 CYP7B1O75881 506 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 KCNH1O95259 989 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 RPL11P62913 178 aaKnown RBP4.03□□□□□ -1.76
KNTC1-213ENST00000542727 SMAD4Q13485 552 aaKnown RBP4.03□□□□□ -1.76
KNTC1-213ENST00000542727 METTL16Q86W50 562 aaKnown RBP4.03□□□□□ -1.76
KNTC1-213ENST00000542727 TRIM59Q8IWR1 403 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 FAM126BQ8IXS8 530 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 Q8N1Y9 231 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 WRNIP1Q96S55 665 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 NKX2-4Q9H2Z4 354 aa4.03□□□□□ -1.76
KNTC1-213ENST00000542727 C22orf46C9J442 243 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 SGSM2O43147 1006 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 MYO1BO43795 1136 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 THBDP07204 575 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 TNFRSF1AP19438 455 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 NASPP49321 788 aaPredicted RBP4.02□□□□□ -1.77
KNTC1-213ENST00000542727 KCNAB2Q13303 367 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 TBC1D10BQ4KMP7 808 aaPredicted RBP4.02□□□□□ -1.77
KNTC1-213ENST00000542727 GTF2IRD2BQ6EKJ0 949 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 CD300LDQ6UXZ3 194 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 GTF2IRD2Q86UP8 949 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 LCORQ96JN0 433 aaPredicted RBP4.02□□□□□ -1.77
KNTC1-213ENST00000542727 APEX2Q9UBZ4 518 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 ZNF652Q9Y2D9 606 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.02□□□□□ -1.77
KNTC1-213ENST00000542727 SIT1Q9Y3P8 196 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 TIMM13Q9Y5L4 95 aaPredicted RBP4.02□□□□□ -1.77
KNTC1-213ENST00000542727 X6R8D5 127 aa4.02□□□□□ -1.77
KNTC1-213ENST00000542727 HOXC12P31275 282 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 ITGA1P56199 1179 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 NKX3-2P78367 333 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 TESK1Q15569 626 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 PRR31Q5SQ13 230 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 ACBD5Q5T8D3 534 aaPredicted RBP4.01□□□□□ -1.77
KNTC1-213ENST00000542727 MBLAC2Q68D91 279 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 GLB1LQ6UWU2 654 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 MILR1Q7Z6M3 343 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 TEX2Q8IWB9 1127 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 CHST13Q8NET6 341 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 DPF3Q92784 378 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 DVL3Q92997 716 aaPredicted RBP4.01□□□□□ -1.77
KNTC1-213ENST00000542727 LOXL4Q96JB6 756 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 MRGPRX3Q96LB0 322 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 CCDC140Q96MF4 163 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 YIPF4Q9BSR8 244 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 GPRC5CQ9NQ84 441 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 INVSQ9Y283 1065 aa4.01□□□□□ -1.77
KNTC1-213ENST00000542727 COA3Q9Y2R0 106 aaPredicted RBP4.01□□□□□ -1.77
KNTC1-213ENST00000542727 MATN3O15232 486 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 CPP00450 1065 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 SCG5P05408 212 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 ZNF20P17024 532 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 ZXDAP98168 799 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 NT5DC4Q86YG4 428 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 TXNDC5Q8NBS9 432 aaKnown RBP4□□□□□ -1.77
KNTC1-213ENST00000542727 NPLOC4Q8TAT6 608 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 FRS2Q8WU20 508 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 DIO2Q92813 273 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 TRMT2BQ96GJ1 504 aaKnown RBP4□□□□□ -1.77
KNTC1-213ENST00000542727 TMEM169Q96HH4 297 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 CDK5RAP1Q96SZ6 601 aaKnown RBP4□□□□□ -1.77
KNTC1-213ENST00000542727 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 TGIF2Q9GZN2 237 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 PODXL2Q9NZ53 605 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 SRRDQ9UH36 339 aa4□□□□□ -1.77
KNTC1-213ENST00000542727 ZNF536O15090 1300 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 H7BY64 318 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 MEFVO15553 781 aaPredicted RBP3.99□□□□□ -1.77
KNTC1-213ENST00000542727 LAMTOR5O43504 91 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 MAFKO60675 156 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 ZNF28P17035 718 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 INF2Q27J81 1249 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 TNNI3KQ59H18 835 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 EMC4Q5J8M3 183 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 C9orf131Q5VYM1 1079 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 MCTP2Q6DN12 878 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 CEP68Q76N32 757 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 C8orf49Q96NF6 230 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 CLIC6Q96NY7 704 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 TMEM209Q96SK2 561 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 BTG4Q9NY30 223 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 DTLQ9NZJ0 730 aa3.99□□□□□ -1.77
KNTC1-213ENST00000542727 HGSO14964 777 aaPredicted RBP3.98□□□□□ -1.77
KNTC1-213ENST00000542727 CYP1A1P04798 512 aaPredicted RBP3.98□□□□□ -1.77
KNTC1-213ENST00000542727 FPR2P25090 351 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 HDLBPQ00341 1268 aaKnown RBP3.98□□□□□ -1.77
KNTC1-213ENST00000542727 CR1LQ2VPA4 569 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 PRAMEF18Q5VWM3 479 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 CYP4F22Q6NT55 531 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 FAM26EQ8N5C1 309 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 FAM169BQ8N8A8 192 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 PHOSPHO1Q8TCT1 267 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 PPP1R14AQ96A00 147 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 TOE1Q96GM8 510 aaKnown RBP3.98□□□□□ -1.77
KNTC1-213ENST00000542727 SSBP3Q9BWW4 388 aaPredicted RBP3.98□□□□□ -1.77
KNTC1-213ENST00000542727 L2HGDHQ9H9P8 463 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 HSPBP1Q9NZL4 362 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 INPP5FQ9Y2H2 1132 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 TSC22D4Q9Y3Q8 395 aa3.98□□□□□ -1.77
KNTC1-213ENST00000542727 DDX3XO00571 662 aaKnown RBP eCLIP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms