RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 TEX33O43247 280 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 CYTH3O43739 400 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 ABCB4P21439 1286 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 POLR2FP61218 127 aaKnown RBP11.23□□□□□ -0.61
TOP3A-208ENST00000542570 GNPTABQ3T906 1256 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 CNGA4Q8IV77 575 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 NAP1L4Q99733 375 aaKnown RBP11.23□□□□□ -0.61
TOP3A-208ENST00000542570 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
TOP3A-208ENST00000542570 SHMT1P34896 483 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 PAFAH1B1P43034 410 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 PKN1Q16512 942 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 CCDC144BQ3MJ40 725 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 LRRC8AQ8IWT6 810 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 ZDHHC15Q96MV8 337 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 GDAP1L1Q96MZ0 367 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 FHDC1Q9C0D6 1143 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-208ENST00000542570 STK36Q9NRP7 1315 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 DYDC2Q96IM9 177 aa11.23□□□□□ -0.61
TOP3A-208ENST00000542570 ARMCX3Q9UH62 379 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-208ENST00000542570 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
TOP3A-208ENST00000542570 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 LSM14BQ9BX40 385 aaKnown RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 SYNCQ9H7C4 482 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 SRGAP2CP0DJJ0 459 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 COPB1P53618 953 aaKnown RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 POLGP54098 1239 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 MOB2Q70IA6 237 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 PHLDB2Q86SQ0 1253 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 APOL6Q9BWW8 343 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 LARSQ9P2J5 1176 aaKnown RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 SLC37A4O43826 429 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 CA8P35219 290 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 FMR1Q06787 632 aaKnown RBP eCLIP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 RBL2Q08999 1139 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 KSR1Q8IVT5 923 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 CARD6Q9BX69 1037 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
TOP3A-208ENST00000542570 NOD1Q9Y239 953 aa11.22□□□□□ -0.61
TOP3A-208ENST00000542570 LRRN2O75325 713 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 USP14P54578 494 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 STRN3Q13033 797 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 MTMR1Q13613 665 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 IPO5O00410 1097 aaKnown RBP11.21□□□□□ -0.61
TOP3A-208ENST00000542570 BUB1O43683 1085 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
TOP3A-208ENST00000542570 PEX3P56589 373 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 DEPTORQ8TB45 409 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
TOP3A-208ENST00000542570 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-208ENST00000542570 ROBO1Q9Y6N7 1651 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 ENC1O14682 589 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 HNRNPDLO14979 420 aaKnown RBP11.21□□□□□ -0.62
TOP3A-208ENST00000542570 PEX10O60683 326 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 CSPG5O95196 566 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 MAGEA1P43355 309 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 ATP2C1P98194 919 aaPredicted RBP11.21□□□□□ -0.62
TOP3A-208ENST00000542570 TMCO3Q6UWJ1 677 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 SPZ1Q9BXG8 430 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.62
TOP3A-208ENST00000542570 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 SRCAPQ6ZRS2 3230 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 RGPD5Q99666 1765 aa11.21□□□□□ -0.62
TOP3A-208ENST00000542570 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 KLHL30Q0D2K2 578 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 PPM1KQ8N3J5 372 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 P2RX5Q93086 422 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 IMPG2Q9BZV3 1241 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 KRT86O43790 486 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ENTPD3O75355 529 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 CLEC17AQ6ZS10 378 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ARMC9Q7Z3E5 817 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 ALS2CR12Q96Q35 445 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 VCPKMTQ9H867 229 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 PAXBP1Q9Y5B6 917 aa11.2□□□□□ -0.62
TOP3A-208ENST00000542570 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-208ENST00000542570 WNT7AO00755 349 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms