RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 EIF3CLB5ME19 914 aaKnown RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 PES1O00541 588 aaKnown RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 TRIM37O94972 964 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 TUBBP07437 444 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 HNRNPH3P31942 346 aaKnown RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 CRKP46108 304 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 MCM6Q14566 821 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 MAN2A1Q16706 1144 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 CCDC96Q2M329 555 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 MOXD1Q6UVY6 613 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 EIF3CQ99613 913 aaKnown RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 IDI2Q9BXS1 227 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 PARD6BQ9BYG5 372 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 NT5C3AQ9H0P0 336 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 TMX4Q9H1E5 349 aaPredicted RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 ZNHIT6Q9NWK9 470 aaKnown RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 NYAP2Q9P242 653 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 PRDM4Q9UKN5 801 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 EP400Q96L91 3159 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 KIF20AO95235 890 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 TBC1D8O95759 1140 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 HERVK_113P62684 666 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 UBE2SQ16763 222 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 MCTP2Q6DN12 878 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 TTBK2Q6IQ55 1244 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 ARHGAP27Q6ZUM4 889 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 TEX2Q8IWB9 1127 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 FLAD1Q8NFF5 587 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 HAS1Q92839 578 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 AKT1S1Q96B36 256 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 MBOAT7Q96N66 472 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 UBXN6Q9BZV1 441 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 DNAJC18Q9H819 358 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 PSTPIP2Q9H939 334 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 ARFGAP3Q9NP61 516 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 SLC39A2Q9NP94 309 aa7.29□□□□□ -1.24
PTPRO-208ENST00000542557 COL2A1P02458 1487 aaPredicted RBP7.29□□□□□ -1.24
PTPRO-208ENST00000542557 CYP3A7-CYP3A51PA0A087WV96 503 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 USP17L10C9JJH3 530 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 IPO7O95373 1038 aaKnown RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 CYP3A7P24462 503 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PLA2G4AP47712 749 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 SCNN1DP51172 638 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 USP11P51784 963 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 NFIAQ12857 509 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 AP3B2Q13367 1082 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 TERF2Q15554 542 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 DOK7Q18PE1 504 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 VWA3BQ502W6 1294 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 LRRC55Q6ZSA7 311 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 TRAPPC11Q7Z392 1133 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 CCDC84Q86UT8 332 aaPredicted RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 MSL3Q8N5Y2 521 aaKnown RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 ANKZF1Q9H8Y5 726 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 QTRT2Q9H974 415 aaKnown RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 MYO6Q9UM54 1294 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 SIK3Q9Y2K2 1263 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 ANO9A1A5B4 782 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 CTAGE15A4D2H0 777 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 MPHOSPH10O00566 681 aaKnown RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 KRT86O43790 486 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 ABL1P00519 1130 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 CTAGE8P0CG41 777 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 ZCWPW2Q504Y3 356 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 STRIP1Q5VSL9 837 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 KCNK18Q7Z418 384 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 CTAGE6Q86UF2 777 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 CTAGE4Q8IX94 777 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 DDX12PQ92771 950 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 DNAJC19Q96DA6 116 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PURBQ96QR8 312 aaKnown RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 TSG101Q99816 390 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 NUDT12Q9BQG2 462 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 MXD3Q9BW11 206 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 EDEM3Q9BZQ6 932 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 TSGA10Q9BZW7 698 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 NDST4Q9H3R1 872 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 NHEJ1Q9H9Q4 299 aaPredicted RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 KCNMB3Q9NPA1 279 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 AGPAT5Q9NUQ2 364 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PI4KBQ9UBF8 816 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PLAGL2Q9UPG8 496 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 ATRNL1Q5VV63 1379 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 A6NJR5 290 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 G3V3G9 751 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PLSCR1O15162 318 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 HSPA1LP34931 641 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 QRICH1Q2TAL8 776 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 DCAF8Q5TAQ9 597 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PAPD7Q5XG87 772 aaKnown RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 TATDN1Q6P1N9 297 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 KCTD1Q719H9 257 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 COL23A1Q86Y22 540 aaPredicted RBP7.28□□□□□ -1.24
PTPRO-208ENST00000542557 HPS3Q969F9 1004 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 JAKMIP2Q96AA8 810 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 EPC1Q9H2F5 836 aa7.28□□□□□ -1.24
PTPRO-208ENST00000542557 PCDHA12Q9UN75 941 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms