RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 VSIG10LQ86VR7 867 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 RAB11FIP4Q86YS3 637 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 HIPK3Q9H422 1215 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 MTMR10Q9NXD2 777 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 MRVI1Q9Y6F6 885 aa18.98■□□□□ 0.63
CCND1-205ENST00000542367 TSGA10IPQ3SY00 556 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 FAM47CQ5HY64 1035 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 C16orf59Q7L2K0 433 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 SGMS1Q86VZ5 419 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 FANCBQ8NB91 859 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 IL31RAQ8NI17 732 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 PPP1R13LQ8WUF5 828 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 ZFP91Q96JP5 570 aaPredicted RBP18.97■□□□□ 0.63
CCND1-205ENST00000542367 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCND1-205ENST00000542367 TRMT13Q9NUP7 481 aaKnown RBP18.97■□□□□ 0.63
CCND1-205ENST00000542367 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
CCND1-205ENST00000542367 UMODL1Q5DID0 1318 aa18.97■□□□□ 0.63
CCND1-205ENST00000542367 RGS20O76081 388 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 MMP3P08254 477 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 SUPT20HL2P0C7V6 817 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 ACRP10323 421 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 CCND2P30279 289 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 EXOSC10Q01780 885 aaKnown RBP18.96■□□□□ 0.63
CCND1-205ENST00000542367 ADCK5Q3MIX3 580 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 TMEM240Q5SV17 173 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 FAM109BQ6ICB4 259 aaPredicted RBP18.96■□□□□ 0.63
CCND1-205ENST00000542367 NFRKBQ6P4R8 1299 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 SYNE3Q6ZMZ3 975 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 DHX32Q7L7V1 743 aaKnown RBP18.96■□□□□ 0.63
CCND1-205ENST00000542367 CCDC82Q8N4S0 544 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 TCEANC2Q96MN5 208 aa18.96■□□□□ 0.63
CCND1-205ENST00000542367 NOC4LQ9BVI4 516 aaKnown RBP18.96■□□□□ 0.63
CCND1-205ENST00000542367 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
CCND1-205ENST00000542367 CASTP20810 708 aaKnown RBP18.95■□□□□ 0.62
CCND1-205ENST00000542367 CCL23P55773 120 aa18.95■□□□□ 0.62
CCND1-205ENST00000542367 CHMP4BP1P59074 171 aa18.95■□□□□ 0.62
CCND1-205ENST00000542367 SMAD3P84022 425 aaKnown RBP18.95■□□□□ 0.62
CCND1-205ENST00000542367 LAMC2Q13753 1193 aa18.95■□□□□ 0.62
CCND1-205ENST00000542367 KCNV1Q6PIU1 500 aa18.95■□□□□ 0.62
CCND1-205ENST00000542367 MICU3Q86XE3 530 aa18.95■□□□□ 0.62
CCND1-205ENST00000542367 DHX37Q8IY37 1157 aaKnown RBP18.95■□□□□ 0.62
CCND1-205ENST00000542367 hCG_1642624A0A1W2PR95 340 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 NEFLP07196 543 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 CYP2C9P11712 490 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 KRT32Q14532 448 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 DGKDQ16760 1214 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 ZNF365Q70YC5 407 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 SMARCC2Q8TAQ2 1214 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 CUL5Q93034 780 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 EMID1Q96A84 441 aaPredicted RBP18.94■□□□□ 0.62
CCND1-205ENST00000542367 FAM161BQ96MY7 647 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 IL23AQ9NPF7 189 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
CCND1-205ENST00000542367 COL6A3P12111 3177 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 MRPS9P82933 396 aaKnown RBP18.93■□□□□ 0.62
CCND1-205ENST00000542367 PTPN11Q06124 597 aaPredicted RBP18.93■□□□□ 0.62
CCND1-205ENST00000542367 ZNF697Q5TEC3 545 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 MYSM1Q5VVJ2 828 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 APOA5Q6Q788 366 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 USP17L6PQ6QN14 398 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 TMTC3Q6ZXV5 915 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 KAT2BQ92831 832 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 BRPF3Q9ULD4 1205 aa18.93■□□□□ 0.62
CCND1-205ENST00000542367 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.92■□□□□ 0.62
CCND1-205ENST00000542367 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.92■□□□□ 0.62
CCND1-205ENST00000542367 PIK3CDO00329 1044 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 MEIS2O14770 477 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 SORBS3O60504 671 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 TGFB3P10600 412 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 SP2Q02086 613 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 CELF3Q5SZQ8 465 aaKnown RBP18.92■□□□□ 0.62
CCND1-205ENST00000542367 PSRC1Q6PGN9 363 aaPredicted RBP18.92■□□□□ 0.62
CCND1-205ENST00000542367 PPTC7Q8NI37 304 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 GPKOWQ92917 476 aaPredicted RBP eCLIP18.92■□□□□ 0.62
CCND1-205ENST00000542367 SCLYQ96I15 445 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 RTEL1Q9NZ71 1219 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 FRMPD4Q14CM0 1322 aa18.92■□□□□ 0.62
CCND1-205ENST00000542367 ZBTB43O43298 467 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 GGPS1O95749 300 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 FGBP02675 491 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 HMGB1P09429 215 aaKnown RBP18.91■□□□□ 0.62
CCND1-205ENST00000542367 KCNB2Q92953 911 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 SEMA6BQ9H3T3 888 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 RBM28Q9NW13 759 aaKnown RBP18.91■□□□□ 0.62
CCND1-205ENST00000542367 STXBP5LQ9Y2K9 1186 aa18.91■□□□□ 0.62
CCND1-205ENST00000542367 STAM2O75886 525 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 CPA1P15085 419 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 UBA1P22314 1058 aaKnown RBP18.9■□□□□ 0.62
CCND1-205ENST00000542367 PTGISQ16647 500 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 RTN1Q16799 776 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 HSDL1Q3SXM5 330 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 GNPTABQ3T906 1256 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 RASIP1Q5U651 963 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 RPUSD2Q8IZ73 545 aaKnown RBP18.9■□□□□ 0.62
CCND1-205ENST00000542367 GUCD1Q96NT3 240 aa18.9■□□□□ 0.62
CCND1-205ENST00000542367 MLXIPQ9HAP2 919 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms